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rifcsphigho2_01_scaffold_9376

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_9376_1

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175..408
-----------------
DNA (234bp)
protein (78aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
rpoH; DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] id=5241332 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_9376_2
AR10, Diapherotrites, DPANN, Archaea

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408..1886
-----------------
DNA (1479bp)
protein (493aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5241333 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=AR10
rifcsphigho2_01_scaffold_9376_3
AR10, Diapherotrites, DPANN, Archaea

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1893..3707
-----------------
DNA (1815bp)
protein (605aa)
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5241335 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=AR10
rifcsphigho2_01_scaffold_9376_4
AR10, Diapherotrites, DPANN, Archaea

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3710..6322
-----------------
DNA (2613bp)
protein (871aa)
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5241336 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=AR10
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rifcsphigho2_01_scaffold_9376_5
unknown

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6319..6507
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9376_6

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6658..7542
-----------------
DNA (885bp)
protein (295aa)
rpoA2; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5241337 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:AJF60328.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AJF60328.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_9376_7

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7539..7862
-----------------
DNA (324bp)
protein (108aa)
50S ribosomal protein L30, large subunit ribosomal protein L30e {ECO:0000313|EMBL:KHO55780.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L30e
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e id=5241338 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_9376_8

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7868..8293
-----------------
DNA (426bp)
protein (142aa)
NusA family KH domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNF1_ARCVS
N utilization substance protein A {ECO:0000313|EMBL:KHO55781.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
NusA family KH domain-containing protein
rifcsphigho2_01_scaffold_9376_9
AR10, Diapherotrites, DPANN, Archaea

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8295..8723
-----------------
DNA (429bp)
protein (143aa)
30S ribosomal protein S12, small subunit ribosomal protein S12
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5241340 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=AR10
rifcsphigho2_01_scaffold_9376_10

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8729..9331
-----------------
DNA (603bp)
protein (201aa)
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO55783.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S7
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 id=5241341 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_9376_11

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9341..13078
-----------------
DNA (3738bp)
protein (1246aa)
Elongation factor 2 n=2 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=EF2_METKA
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
FusA; elongation factor EF-2
rifcsphigho2_01_scaffold_9376_12
AR10, Diapherotrites, DPANN, Archaea

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13216..14496
-----------------
DNA (1281bp)
protein (427aa)
elongation factor 1-alpha (EC:2.7.7.4)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5241343 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha Tax=AR10
rifcsphigho2_01_scaffold_9376_13

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14667..15272
-----------------
DNA (606bp)
protein (202aa)
small subunit ribosomal protein S10
SSU ribosomal protein s10p; K02946 small subunit ribosomal protein S10 id=5241344 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 13 items

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