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rifcsphigho2_01_scaffold_42813

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_42813_1

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comp(3..281)
-----------------
DNA (279bp)
protein (93aa)
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5241813 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein {ECO:0000313|EMBL:AJF60804.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_42813_2
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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377..1504
-----------------
DNA (1128bp)
protein (376aa)
geranylgeranyl pyrophosphate synthetase (EC:2.5.1.1); K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
rifcsphigho2_01_scaffold_42813_3
AR10, Diapherotrites, DPANN, Archaea

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1515..2396
-----------------
DNA (882bp)
protein (294aa)
hypothetical protein
hypothetical protein id=5241810 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsphigho2_01_scaffold_42813_4
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(2393..3073)
-----------------
DNA (681bp)
protein (227aa)
Acylphosphatase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4A4_9ARCH
acylphosphatase
Acylphosphatase {ECO:0000313|EMBL:BAJ47123.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
rifcsphigho2_01_scaffold_42813_5
CG_Micra_05, Micraarchaeota, Archaea

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3196..3609
-----------------
DNA (414bp)
protein (138aa)
translation initiation factor IF-2 subunit beta; K03238 translation initiation factor 2 subunit 2 Tax=CG_Micra_05
translation initiation factor 2 subunit 2
translation initiation factor aIF-2 subunit beta; K03238 translation initiation factor 2 subunit 2 id=5241803 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_42813_6
AR10, Diapherotrites, DPANN, Archaea

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3614..3919
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein; K09148 hypothetical protein id=5241802 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
hypothetical protein; K09148 hypothetical protein Tax=AR10
rifcsphigho2_01_scaffold_42813_7

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3948..4286
-----------------
DNA (339bp)
protein (113aa)
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
translation initiation factor 1A
Translation initiation factor 1A (AeIF-1A); K03236 translation initiation factor 1A id=5241801 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_42813_8
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4291..4992
-----------------
DNA (702bp)
protein (234aa)
Creatininase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1APX6_PELPD
Creatinine amidohydrolase {ECO:0000313|EMBL:GAM11584.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR
creatininase
rifcsphigho2_01_scaffold_42813_9
AR10, Diapherotrites, DPANN, Archaea

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5112..5540
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein
PIN domain-like id=5241292 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PIN domain-like Tax=AR10
rifcsphigho2_01_scaffold_42813_10
unknown

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comp(5537..5812)
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsphigho2_01_scaffold_42813_11

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5892..6590
-----------------
DNA (699bp)
protein (233aa)
RIO kinase 1 (EC:2.7.11.1)
RIO kinase 1 {ECO:0000313|EMBL:AJF60791.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AJF60791.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
kinase RIO1 family protein (EC:2.7.11.1); K07178 RIO kinase 1 [EC:2.7.11.1] id=5241800 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_42813_12
unknown

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comp(6615..7214)
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

rifcsphigho2_01_scaffold_42813_13
AR10, Diapherotrites, DPANN, Archaea

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7337..7531
-----------------
DNA (195bp)
protein (65aa)
hypothetical protein
hypothetical protein id=5241432 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsphigho2_01_scaffold_42813_14
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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7528..7704
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U063_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EKQ53696.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
hypothetical protein
rifcsphigho2_01_scaffold_42813_15
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

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comp(7746..7979)
-----------------
DNA (234bp)
protein (78aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine-tRNA ligase {ECO:0000313|EMBL:KKQ67113.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta id=2122795 bin=GWB2_Chloroflexi_54_36 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Displaying 15 items

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