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rifcsphigho2_01_scaffold_62626

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_62626_1
AR10, Diapherotrites, DPANN, Archaea

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comp(3..134)
-----------------
DNA (132bp)
protein (44aa)
Uncharacterized membrane protein Tax=AR10
rifcsphigho2_01_scaffold_62626_2
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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262..828
-----------------
DNA (567bp)
protein (189aa)
Exosome complex RNA-binding protein Csl4 n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HN61_THES4
RNA-binding protein
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus paci
rifcsphigho2_01_scaffold_62626_3
AR10, Diapherotrites, DPANN, Archaea

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848..1126
-----------------
DNA (279bp)
protein (93aa)
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5241762 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] Tax=AR10
rifcsphigho2_01_scaffold_62626_4
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1138..1713
-----------------
DNA (576bp)
protein (192aa)
UPF0215 protein MTBMA_c17020 n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PYH3_METTM
hypothetical protein
UPF0215 protein MTBMA_c17020 {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Me
rifcsphigho2_01_scaffold_62626_5
unknown

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1750..2274
-----------------
DNA (525bp)
protein (175aa)

This feature has no annotations

rifcsphigho2_01_scaffold_62626_6
AR10, Diapherotrites, DPANN, Archaea

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2314..3069
-----------------
DNA (756bp)
protein (252aa)
signal peptidase, endoplasmic reticulum-type (EC:3.4.-.-)
signal peptidase subunit; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] id=5241763 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
signal peptidase subunit; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=AR10
rifcsphigho2_01_scaffold_62626_7

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3066..3842
-----------------
DNA (777bp)
protein (259aa)
proliferating cell nuclear antigen
proliferating-cell nuclear antigen Pol30; K04802 proliferating cell nuclear antigen id=5241764 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1579370 species="Arch
rifcsphigho2_01_scaffold_62626_8
unknown

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3923..4495
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsphigho2_01_scaffold_62626_9
unknown

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comp(4498..5130)
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein VspiD_19695 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745B81 Tax=ACD2
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GGB3_9BACT
haloacid dehalogenase domain-containing protein hydrolase
rifcsphigho2_01_scaffold_62626_10
AR10, Diapherotrites, DPANN, Archaea

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5209..5934
-----------------
DNA (726bp)
protein (242aa)
proliferating cell nuclear antigen
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen id=5241766 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen Tax=AR10
rifcsphigho2_01_scaffold_62626_11

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5994..7001
-----------------
DNA (1008bp)
protein (336aa)
priL; DNA primase large subunit (EC:2.7.7.-)
priL; DNA primase, large subunit (EC:2.7.7.-); K02685 DNA primase large subunit [EC:2.7.7.-] id=5241767 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 11 items

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