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rifcsphigho2_01_scaffold_12022_19

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Diapherotrites_AR10_44_11

partial RP 30 / 55 MC: 5 BSCG 17 / 51 MC: 1 ASCG 26 / 38 MC: 2
Location: 11561..12277

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component RRP4 {ECO:0000313|EMBL:KHO55691.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 231.0
  • Bit_score: 242
  • Evalue 4.90e-61
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 204.0
  • Bit_score: 241
  • Evalue 2.20e-61
exosome complex RNA-binding protein Rrp4 id=5241843 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 204.0
  • Bit_score: 241
  • Evalue 7.80e-61

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Taxonomy

archaeon GW2011_AR21 → Archaea

Sequences

DNA sequence
Length: 717
ATGCCAAGAACAATAGTAACTCCCGGGGAGCTTATAACCTCGGAAAGGAAGAAGCTTGGAAGCAACGTGCACATGCACGAAGGCAGGATATATTCAACATGCATAGGCCTTGTTGAGGAAGGAACAGATTTCATAAATGTGATTCCCCTTGAGGGGAGATACAGGCCCATGATTGACGATTTGGTCGTGGGAATAGTTACCTCTGAAAGGTTCGGGGGCTATGGAACGGACATAAATTCCTATTACCCGGCGTACATTTCAAGGAAGGAAGTGGACGAGAGCCTCAGGCCCGGAAGCATAATCTCCGCGAAAATCGCAAAAGTAAACGAGATAAATGAAGTGGAGCTGATGAACGTAAGGGTATTCTACGGCGGGGAAATAATTTCTGTCAGCCCTGTGAAAGTCCCAAGGATAATGGGCAGGAACAACAGCATGCTTGATCTCCTGAAGCAGGGAACCAACGCAAACATCCTTATTGGAAAAAACGGAAGGATATGGGCAAAGGGCGGCAACACAAAGCTGCTTGAAAAGGCGATTGCGAAAATAGAAAGGGAAGCGCACATGGAAAACCTGACAAACAAGATTGCGGATTTCCTGAGGGCCGAGAACAAGGGCGCCGGCGCACCAATTTCAGCTGCAAACGGGAAAATTCCTGTTGAGCAAACAAAGCACGCTGACAGCAGATCAATGGAAATGAGCGAGGGAAGAGACATATGA
PROTEIN sequence
Length: 239
MPRTIVTPGELITSERKKLGSNVHMHEGRIYSTCIGLVEEGTDFINVIPLEGRYRPMIDDLVVGIVTSERFGGYGTDINSYYPAYISRKEVDESLRPGSIISAKIAKVNEINEVELMNVRVFYGGEIISVSPVKVPRIMGRNNSMLDLLKQGTNANILIGKNGRIWAKGGNTKLLEKAIAKIEREAHMENLTNKIADFLRAENKGAGAPISAANGKIPVEQTKHADSRSMEMSEGRDI*