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rifcsphigho2_01_scaffold_14575

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_14575_1
unknown

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comp(2..1177)
-----------------
DNA (1176bp)
protein (392aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14575_2
GWA2_OP3_52_12, GWA2_OP3_52_12, GWA2_OP3_52_12, GWA2_OP3_52_12, Omnitrophica, Bacteria

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1255..1686
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein id=4757606 bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein id=4757606 bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
rifcsphigho2_01_scaffold_14575_3
unknown

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1692..2048
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14575_4

Not on your lists

comp(2038..2772)
-----------------
DNA (735bp)
protein (245aa)
serine protease; K06870 uncharacterized protein id=18248410 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48413.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
serine protease
rifcsphigho2_01_scaffold_14575_5

Not on your lists

comp(2791..3336)
-----------------
DNA (546bp)
protein (182aa)
Putative uncharacterized protein id=4688821 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO48412.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
rifcsphigho2_01_scaffold_14575_6
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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4272..6035
-----------------
DNA (1764bp)
protein (588aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7P9_UNCMA
putative transcriptional regulator, TrmB
Uncharacterized protein {ECO:0000313|EMBL:CAJ35594.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsphigho2_01_scaffold_14575_7
AR10, Diapherotrites, DPANN, Archaea

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6232..6960
-----------------
DNA (729bp)
protein (243aa)
oxidoreductase FAD/NAD(P)-binding subunit; K00351 Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:1.6.5.-] Tax=AR10
Na+-transporting NADH:ubiquinone oxidoreductase subunit F (EC:1.6.5.-)
oxidoreductase FAD/NAD(P)-binding subunit; K00351 Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:1.6.5.-] id=5241039 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_14575_8
unknown

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comp(6964..7935)
-----------------
DNA (972bp)
protein (324aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14575_9
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(8267..8536)
-----------------
DNA (270bp)
protein (90aa)
id=18248465 bin=AR5_curated_draft tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
rifcsphigho2_01_scaffold_14575_10
AR5, Aenigmarchaeota, DPANN, Archaea

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8610..9236
-----------------
DNA (627bp)
protein (209aa)
rnhC; ribonuclease HIII (fragment) (EC:3.1.26.4); K03471 ribonuclease HIII [EC:3.1.26.4] id=18248464 bin=AR5_curated_draft species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rnhC; ribonuclease HIII (fragment) (EC:3.1.26.4); K03471 ribonuclease HIII [EC:3.1.26.4] Tax=AR5
rnhC; ribonuclease HIII (fragment) (EC:3.1.26.4)
rifcsphigho2_01_scaffold_14575_11
unknown

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9390..9872
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14575_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10070..10594)
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F3B8D
hypothetical protein Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_14575_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

10613..12211
-----------------
DNA (1599bp)
protein (533aa)
Putative transporter protein id=4845809 bin=PER_GWC2_41_7 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
major facilitator superfamily transporter Tax=AR5
major facilitator superfamily transporter
rifcsphigho2_01_scaffold_14575_14
unknown

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comp(12222..12434)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14575_15

Not on your lists

12803..13162
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein
Putative uncharacterized protein id=4845810 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO48459.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsphigho2_01_scaffold_14575_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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13277..13429
-----------------
DNA (153bp)
protein (51aa)
fused DNA topoisomerase I/SWI domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Fused DNA topoisomerase I/SWI domain-containing protein id=4863511 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rifcsphigho2_01_scaffold_14575_17
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(13690..13860)
-----------------
DNA (171bp)
protein (57aa)
id=4845814 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR5
rifcsphigho2_01_scaffold_14575_18
unknown

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14026..14586
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14575_19
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14586..15254
-----------------
DNA (669bp)
protein (223aa)
Rhomboid family protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAJ8_9RHIZ
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AGK60008.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
rifcsphigho2_01_scaffold_14575_20
unknown

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15297..15410
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14575_21
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

15449..16009
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein Tax=AR5
hypothetical protein id=18248438 bin=AR5_curated_draft species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative membrane protein
rifcsphigho2_01_scaffold_14575_22
unknown

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comp(16010..16750)
-----------------
DNA (741bp)
protein (247aa)

This feature has no annotations

Displaying 22 items

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