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rifcsphigho2_01_scaffold_21280

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_21280_1

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comp(223..1203)
-----------------
DNA (981bp)
protein (327aa)
hypothetical protein; K07027 id=5042143 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO48097.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
rifcsphigho2_01_scaffold_21280_2
AR5, Aenigmarchaeota, DPANN, Archaea

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1400..2332
-----------------
DNA (933bp)
protein (311aa)
Transcription initiation factor IIB id=3524326 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
transcription initiation factor IIB (TFIIB); K03124 transcription initiation factor TFIIB Tax=AR5
Transcription initiation factor IIB
rifcsphigho2_01_scaffold_21280_3

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2441..2620
-----------------
DNA (180bp)
protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:AJF62637.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_21280_4
GWB1_OP11_44_6, Collierbacteria, Microgenomates, Bacteria

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2647..2847
-----------------
DNA (201bp)
protein (67aa)
Tax=GWB1_OP11_44_6
rifcsphigho2_01_scaffold_21280_5
AR17, Woesearchaeaota, DPANN, Archaea

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2852..3511
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein
hypothetical protein id=86908 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Tax=AR17
rifcsphigho2_01_scaffold_21280_6
AR5, Aenigmarchaeota, DPANN, Archaea

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3550..3858
-----------------
DNA (309bp)
protein (103aa)
hypothetical protein id=18248224 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsphigho2_01_scaffold_21280_7
AR5, Aenigmarchaeota, DPANN, Archaea

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4040..5194
-----------------
DNA (1155bp)
protein (385aa)
nucleotidyl transferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=AR5
Nucleotidyl transferase id=3524321 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
nucleotidyl transferase
rifcsphigho2_01_scaffold_21280_8

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5148..6914
-----------------
DNA (1767bp)
protein (589aa)
glucosamine/fructose-6-phosphate aminotransferase, isomerizing; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] id=5042137 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Glucosamine-fructose-6-phosphate aminotransferase isomerizing {ECO:0000313|EMBL:KHO48091.1}; EC=2.6.1.16 {ECO:0000313|EMBL:KHO48091.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
rifcsphigho2_01_scaffold_21280_9
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

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6971..7561
-----------------
DNA (591bp)
protein (197aa)
seg Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
seg id=5801886 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
rifcsphigho2_01_scaffold_21280_10

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comp(7588..9129)
-----------------
DNA (1542bp)
protein (514aa)
ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1] id=5042135 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=1579367 species="Archaea.;"
ATP-dependent DNA ligase
Displaying 10 items

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