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rifcsphigho2_01_scaffold_11843

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_11843_1
unknown

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3..1115
-----------------
DNA (1113bp)
protein (371aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_2
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

1117..1842
-----------------
DNA (726bp)
protein (242aa)
Tax=AR6
rifcsphigho2_01_scaffold_11843_3
unknown

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1873..2103
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_4
unknown

Not on your lists

2135..2569
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_5

Not on your lists


2702..3670
-----------------
DNA (969bp)
protein (323aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl3p; 50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 id=18248292 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rpl3p; 50S ribosomal protein L3P
rifcsphigho2_01_scaffold_11843_6
unknown

Not on your lists

3672..3998
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_7

Not on your lists


4001..4795
-----------------
DNA (795bp)
protein (265aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS12224.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=18248294 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L4P
rifcsphigho2_01_scaffold_11843_8
AR5, Aenigmarchaeota, DPANN, Archaea

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4792..5235
-----------------
DNA (444bp)
protein (148aa)
hypothetical protein id=18248295 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
large subunit ribosomal protein L23
rifcsphigho2_01_scaffold_11843_9
unknown

Not on your lists

5246..5470
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_10
unknown

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5475..5735
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_11
unknown

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5744..6001
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_12

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6003..6707
-----------------
DNA (705bp)
protein (235aa)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS12225.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2P id=4909359 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L8e (L2p)
rifcsphigho2_01_scaffold_11843_13
unknown

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6704..6919
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_14

Not on your lists


6909..7238
-----------------
DNA (330bp)
protein (110aa)
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=18248297 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rps19p; 30S ribosomal protein S19
rifcsphigho2_01_scaffold_11843_15

Not on your lists


7248..7655
-----------------
DNA (408bp)
protein (136aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=18248298 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_01_scaffold_11843_16

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7610..7771
-----------------
DNA (162bp)
protein (54aa)
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_01_scaffold_11843_17

Not on your lists


7779..8483
-----------------
DNA (705bp)
protein (235aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=18248299 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S3
rifcsphigho2_01_scaffold_11843_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


8486..8695
-----------------
DNA (210bp)
protein (70aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=5044368 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=AR5
rifcsphigho2_01_scaffold_11843_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

8692..8994
-----------------
DNA (303bp)
protein (101aa)
Protein translation factor SUI1 homolog id=4909364 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 Tax=AR5
translation initiation factor 1 (eif-1/sui1)
rifcsphigho2_01_scaffold_11843_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9006..9281
-----------------
DNA (276bp)
protein (92aa)
Ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] id=5044370 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=AR5
ribonuclease P protein component 1
rifcsphigho2_01_scaffold_11843_21

Not on your lists


9292..9651
-----------------
DNA (360bp)
protein (120aa)
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS12229.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5044371 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
30S ribosomal protein S17
rifcsphigho2_01_scaffold_11843_22

Not on your lists


9648..10049
-----------------
DNA (402bp)
protein (134aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P id=4909394 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L14P
rifcsphigho2_01_scaffold_11843_23

Not on your lists


10113..10511
-----------------
DNA (399bp)
protein (133aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P id=4909395 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rpl24p; 50S ribosomal protein L24
rifcsphigho2_01_scaffold_11843_24

Not on your lists


10518..11207
-----------------
DNA (690bp)
protein (230aa)
30S ribosomal protein S4e id=4909396 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S4
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsphigho2_01_scaffold_11843_25

Not on your lists


11209..11706
-----------------
DNA (498bp)
protein (166aa)
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12232.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=18248308 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L5
rifcsphigho2_01_scaffold_11843_26

Not on your lists


11878..12264
-----------------
DNA (387bp)
protein (129aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8 id=4909399 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S8P
rifcsphigho2_01_scaffold_11843_27

Not on your lists


12276..12848
-----------------
DNA (573bp)
protein (191aa)
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS12234.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl6p; 50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 id=5044379 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rpl6p; 50S ribosomal protein L6P
rifcsphigho2_01_scaffold_11843_28
unknown

Not on your lists

12852..13235
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11843_29

Not on your lists

13232..13633
-----------------
DNA (402bp)
protein (134aa)
rpl32e; 50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5044380 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Ribosomal protein L32e Rpl32e {ECO:0000313|EMBL:KHO48315.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
ribosomal protein L32e Rpl32e
rifcsphigho2_01_scaffold_11843_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13895..14353
-----------------
DNA (459bp)
protein (153aa)
50S ribosomal protein L19e id=4909404 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rpl19e; 50S ribosomal protein L19; K02885 large subunit ribosomal protein L19e Tax=AR5
ribosomal protein L19e
Displaying items 1-30 of 44 in total

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