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rifcsphigho2_01_scaffold_29906

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_29906_1

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comp(2..373)
-----------------
DNA (372bp)
protein (124aa)
Putative uncharacterized protein id=4201019 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO47410.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsphigho2_01_scaffold_29906_2
AR15, Woesearchaeaota, DPANN, Archaea

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621..2942
-----------------
DNA (2322bp)
protein (774aa)
Allergen V5/Tpx-1 family protein id=5799661 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Allergen V5/Tpx-1 family protein Tax=AR15
SCP/PR1 domain-containing protein
rifcsphigho2_01_scaffold_29906_3
unknown

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comp(2922..3173)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

rifcsphigho2_01_scaffold_29906_4
unknown

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3418..3708
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

rifcsphigho2_01_scaffold_29906_5

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3750..4424
-----------------
DNA (675bp)
protein (225aa)
RecA/RadA recombinase id=4201017 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
DNA repair and recombination protein DNA repair protein RadB {ECO:0000313|EMBL:KHO47411.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DNA repair and recombination protein radB
rifcsphigho2_01_scaffold_29906_6
unknown

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4469..4774
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_29906_7
unknown

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5039..5182
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_01_scaffold_29906_8
unknown

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comp(5185..5388)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

rifcsphigho2_01_scaffold_29906_9
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(5394..7193)
-----------------
DNA (1800bp)
protein (600aa)
topA; DNA topoisomerase I (topA) (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=18248581 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
topA; DNA topoisomerase I (topA) (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=AR5
DNA topoisomerase I
rifcsphigho2_01_scaffold_29906_10
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(7292..7516)
-----------------
DNA (225bp)
protein (75aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_13_Nitrospirae_43_8_curated
rifcsphigho2_01_scaffold_29906_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(7586..8866)
-----------------
DNA (1281bp)
protein (427aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RBG_13_Woesearchaeota_36_6_curated
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=18248585 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
serS; seryl-tRNA synthetase (EC:6.1.1.11)
rifcsphigho2_01_scaffold_29906_12
AR5, Aenigmarchaeota, DPANN, Archaea

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9002..9301
-----------------
DNA (300bp)
protein (100aa)
methylated-DNA/protein-cysteinemethyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] id=5047681 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
methylated-DNA/protein-cysteinemethyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=AR5
DNA-binding domain, methylated-DNA-[protein]-cysteine S-methyltransferase family protein (EC:2.1.1.63)
rifcsphigho2_01_scaffold_29906_13
unknown

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comp(9303..9539)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_01_scaffold_29906_14

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comp(9569..10648)
-----------------
DNA (1080bp)
protein (360aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA synthetase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7Q3_9ARCH
Marine sediment metagenome DNA, contig: S03H2_L00566 {ECO:0000313|EMBL:GAH39149.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_29906_15

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10741..11550
-----------------
DNA (810bp)
protein (270aa)
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor id=5043112 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO47429.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
beta-lactamase domain-containing protein
Displaying 15 items

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