ggKbase home page

rifcsphigho2_01_scaffold_28267

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_28267_1
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

2..154
-----------------
DNA (153bp)
protein (51aa)
Putative uncharacterized protein Tax=RBG_16_Micrarchaeota_36_9_curated
rifcsphigho2_01_scaffold_28267_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

157..708
-----------------
DNA (552bp)
protein (184aa)
ATPase AAA (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase id=5047667 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ATPase AAA (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase Tax=AR5
ATPase AAA
rifcsphigho2_01_scaffold_28267_3
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

774..2168
-----------------
DNA (1395bp)
protein (465aa)
AAA family ATPase, CDC48 subfamily (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase Tax=CG_Micra_05
AAA ATPase (EC:3.6.1.3)
AAA family ATPase, CDC48 subfamily id=4201021 bin=PER_GWC2_41_7 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_28267_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

2380..3645
-----------------
DNA (1266bp)
protein (422aa)
ATPase AAA (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase id=5047667 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ATPase AAA (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase Tax=AR5
ATPase AAA
rifcsphigho2_01_scaffold_28267_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

3917..4432
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein id=18248572 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsphigho2_01_scaffold_28267_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(4454..5002)
-----------------
DNA (549bp)
protein (183aa)
anthranilate synthase component II (EC:4.1.3.27)
id=4201025 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
alias=gwa2_scaffold_2089_10 Tax=AR5
rifcsphigho2_01_scaffold_28267_7

Not on your lists

comp(5061..5951)
-----------------
DNA (891bp)
protein (297aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5047663 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {
methionine aminopeptidase (EC:3.4.11.18)
rifcsphigho2_01_scaffold_28267_8
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6217..6888)
-----------------
DNA (672bp)
protein (224aa)
gph; phosphoglycolate phosphatase (EC:3.1.3.18)
Putative phosphoglycolate phosphatase n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2LAE6_TRESO
Putative phosphoglycolate phosphatase {ECO:0000313|EMBL:ERF60160.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. so
rifcsphigho2_01_scaffold_28267_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6920..7621)
-----------------
DNA (702bp)
protein (234aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] id=5041873 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=AR4
rifcsphigho2_01_scaffold_28267_10
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7621..8637)
-----------------
DNA (1017bp)
protein (339aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
orotidine 5''-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5091182 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
orotidine 5'-phosphate decarboxylase
rifcsphigho2_01_scaffold_28267_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8707..9729)
-----------------
DNA (1023bp)
protein (341aa)
DNA polymerase X family (EC:2.7.7.7)
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
nis:NIS_1287 family X DNA polymerase IV; K02347 DNA polymerase (family X) id=133327 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Displaying 11 items

View Taxonomy