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rifcsphigho2_01_scaffold_26685

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_26685_1
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(2..925)
-----------------
DNA (924bp)
protein (308aa)
ERCC4-like helicase (EC:3.6.1.-); K10896 fanconi anemia group M protein id=18248903 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ERCC4-like helicase (EC:3.6.1.-); K10896 fanconi anemia group M protein Tax=AR5
Hef nuclease
rifcsphigho2_01_scaffold_26685_2

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965..2236
-----------------
DNA (1272bp)
protein (424aa)
WD40-like repeat protein id=5042058 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:KHO48010.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
cell surface protein
rifcsphigho2_01_scaffold_26685_3
unknown

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2310..2750
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

rifcsphigho2_01_scaffold_26685_4

Not on your lists

2949..3416
-----------------
DNA (468bp)
protein (156aa)
cca; CCA-adding enzyme; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] id=18248904 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA CCA-pyrophosphorylase (EC:2.7.7.72)
Suspect SCG annotation. See neighboring gene [rifcsphigho2_01_scaffold_26685_5].
rifcsphigho2_01_scaffold_26685_5
AR5, Aenigmarchaeota, DPANN, Archaea

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3382..4311
-----------------
DNA (930bp)
protein (310aa)
cca; CCA-adding enzyme; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=AR5
cca; CCA-adding enzyme; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] id=5040629 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
tRNA CCA-pyrophosphorylase (EC:2.7.7.72)
rifcsphigho2_01_scaffold_26685_6
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4410..4754)
-----------------
DNA (345bp)
protein (115aa)
hypothetical protein; K09152 hypothetical protein id=5040630 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein; K09152 hypothetical protein Tax=AR5
hypothetical protein
rifcsphigho2_01_scaffold_26685_7
unknown

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4927..5118
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_01_scaffold_26685_8
unknown

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5156..5542
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

rifcsphigho2_01_scaffold_26685_9
AR5, Aenigmarchaeota, DPANN, Archaea

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5907..6533
-----------------
DNA (627bp)
protein (209aa)
proteasome endopeptidase complex protein (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] id=18248912 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
proteasome endopeptidase complex protein (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=AR5
proteasome endopeptidase complex
rifcsphigho2_01_scaffold_26685_10
AR5, Aenigmarchaeota, DPANN, Archaea

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6653..8512
-----------------
DNA (1860bp)
protein (620aa)
KH-domain/beta-lactamase-domain-containing protein; K07041 id=18248911 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
KH-domain/beta-lactamase-domain-containing protein; K07041 Tax=AR5
kh-domain/beta-lactamase-domain-containing protein
rifcsphigho2_01_scaffold_26685_11
unknown

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comp(8930..9040)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

rifcsphigho2_01_scaffold_26685_12

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9252..9434
-----------------
DNA (183bp)
protein (61aa)
rpl37ae; 50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae id=18248910 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L37Ae, large subunit ribosomal protein L37Ae {ECO:0000313|EMBL:KHO47745.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
50S ribosomal protein L37
rifcsphigho2_01_scaffold_26685_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9586..9924
-----------------
DNA (339bp)
protein (113aa)
Prefoldin subunit beta id=3526819 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
prefoldin subunit beta; K04798 prefoldin beta subunit Tax=AR5
erpK protein
rifcsphigho2_01_scaffold_26685_14

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9921..10199
-----------------
DNA (279bp)
protein (93aa)
UPF0147 protein QT00_C0002G0402 {ECO:0000256|HAMAP-Rule:MF_00342}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein; K09721 hypothetical protein id=18248907 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsphigho2_01_scaffold_26685_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10213..11661)
-----------------
DNA (1449bp)
protein (483aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Woesearch_02
proS; Proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LU79_TEPAE
rifcsphigho2_01_scaffold_26685_16
AR15, Woesearchaeaota, DPANN, Archaea

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comp(11662..12123)
-----------------
DNA (462bp)
protein (154aa)
CsaA protein id=5799728 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
CsaA protein Tax=AR15
Protein secretion chaperonin CsaA
rifcsphigho2_01_scaffold_26685_17
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

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12260..12559
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein n=2 Tax=Microcystis aeruginosa RepID=I4H304_MICAE
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
hypothetical protein
rifcsphigho2_01_scaffold_26685_18
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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12547..12768
-----------------
DNA (222bp)
protein (74aa)
Putative uncharacterized protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
rifcsphigho2_01_scaffold_26685_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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13161..13781
-----------------
DNA (621bp)
protein (207aa)
Homoserine kinase {ECO:0000313|EMBL:EFH83727.1}; EC=2.7.1.39 {ECO:0000313|EMBL:EFH83727.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedon
homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTH6_9CHLR
rifcsphigho2_01_scaffold_26685_20
AR11, Woesearchaeaota, DPANN, Archaea

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13849..14115
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CA56B
Transcriptional regulator, AbrB family Tax=AR11
transcriptional regulator, AbrB family
rifcsphigho2_01_scaffold_26685_21
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

14118..14525
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037058C3
PilT protein domain-containing protein Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein
rifcsphigho2_01_scaffold_26685_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

14815..15762
-----------------
DNA (948bp)
protein (316aa)
Putative uncharacterized protein id=4203300 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein Tax=AR5
FIC protein
rifcsphigho2_01_scaffold_26685_23
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

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15927..16796
-----------------
DNA (870bp)
protein (290aa)
id=3673907 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=3673907 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_26685_24
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(16788..17039)
-----------------
DNA (252bp)
protein (84aa)
putative nuclease; K07461 putative endonuclease id=18248918 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative nuclease; K07461 putative endonuclease Tax=AR5
putative endonuclease containing a URI domain
rifcsphigho2_01_scaffold_26685_25
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(17116..17268)
-----------------
DNA (153bp)
protein (51aa)
alias=gwa2_scaffold_521_94 id=18248287 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_521_94 Tax=AR5
rifcsphigho2_01_scaffold_26685_26

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comp(17335..17772)
-----------------
DNA (438bp)
protein (146aa)
methionine-R-sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] id=5042039 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Peptide-methionine (R)-S-oxide reductase {ECO:0000313|EMBL:KHO47989.1}; EC=1.8.4.12 {ECO:0000313|EMBL:KHO47989.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
rifcsphigho2_01_scaffold_26685_27
AR5, Aenigmarchaeota, DPANN, Archaea

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17818..18342
-----------------
DNA (525bp)
protein (175aa)
alias=gwa2_scaffold_5599_15 id=18248546 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_5599_15 Tax=AR5
rifcsphigho2_01_scaffold_26685_28
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(18344..18973)
-----------------
DNA (630bp)
protein (210aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT72_ARCVS
rifcsphigho2_01_scaffold_26685_29

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comp(18970..19542)
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein id=18248920 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO47755.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
rifcsphigho2_01_scaffold_26685_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

19596..20423
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein id=18248921 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
Displaying items 1-30 of 43 in total

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