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rifcsphigho2_01_scaffold_5837

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5837_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1..966
-----------------
DNA (966bp)
protein (322aa)
antibiotic ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002888F62
multidrug ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_41_19_curated
ABC transporter family protein
rifcsphigho2_01_scaffold_5837_2

Not on your lists

1010..2722
-----------------
DNA (1713bp)
protein (571aa)
ABC-2 type transporter; K09686 antibiotic transport system permease protein id=5046883 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Antibiotic transport system permease protein {ECO:0000313|EMBL:KHO54276.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
antibiotic transport system permease protein
rifcsphigho2_01_scaffold_5837_3
unknown

Not on your lists

3011..3748
-----------------
DNA (738bp)
protein (246aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_4
unknown

Not on your lists

3925..4779
-----------------
DNA (855bp)
protein (285aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_5
unknown

Not on your lists

4840..5094
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_6
unknown

Not on your lists

5157..5579
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_7
unknown

Not on your lists

5600..5944
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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5981..7045
-----------------
DNA (1065bp)
protein (355aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K04479 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] Tax=RBG_16_Micrarchaeota_49_10_curated
UPI0003D1BEB4 related cluster n=1 Tax=unknown RepID=UPI0003D1BEB4
DNA-damage-inducible protein P
rifcsphigho2_01_scaffold_5837_9

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7056..7394
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS37980.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
MazG nucleotide pyrophosphohydrolase domain-containing protein id=2762048 bin=GWC1_TM7_41_48 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWC1_TM7_41_48 organism_group=TM7
hypothetical protein
rifcsphigho2_01_scaffold_5837_10
unknown

Not on your lists

7397..7528
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_11
unknown

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7577..7771
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_12
unknown

Not on your lists

7839..8393
-----------------
DNA (555bp)
protein (185aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_13
unknown

Not on your lists

8431..8754
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_14
unknown

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comp(8764..8901)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_15
RBG_16_OP11_43_9_curated, Microgenomates, Bacteria

Not on your lists

comp(8918..10042)
-----------------
DNA (1125bp)
protein (375aa)
Subtilisin n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M7H8_9EURY
subtilisin Tax=RBG_16_OP11_43_9_curated
peptidase S8/S53 subtilisin kexin sedolisin
rifcsphigho2_01_scaffold_5837_16
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

10124..10675
-----------------
DNA (552bp)
protein (184aa)
Divalent cation transporter n=1 Tax=Methanobrevibacter smithii DSM 2375 RepID=B9AFR6_METSM
transporter protein; K07244 mgtE-like transporter Tax=RBG_16_OP11_39_9b_curated
divalent cation transporter mgtE family
rifcsphigho2_01_scaffold_5837_17
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

10681..11337
-----------------
DNA (657bp)
protein (219aa)
Cation transporter n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TV86_9EURY
Cation transporter Tax=RBG_16_OP11_39_9b_curated
putative transporter protein
rifcsphigho2_01_scaffold_5837_18
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

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11411..12868
-----------------
DNA (1458bp)
protein (486aa)
id=3673813 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=3673813 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_5837_19
unknown

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13242..13451
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_20
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

14360..14623
-----------------
DNA (264bp)
protein (88aa)
DNA-directed RNA polymerase subunit H {ECO:0000255|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00025};; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Therm
DNA-directed RNA polymerase subunit H n=2 Tax=Pyrococcus furiosus RepID=RPOH_PYRFU
DNA-directed RNA polymerase subunit H
rifcsphigho2_01_scaffold_5837_21
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

14665..17937
-----------------
DNA (3273bp)
protein (1091aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=RBG_16_Micrarchaeota_36_9_curated
DNA-directed RNA polymerase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HIC3_PYRSN rbh
DNA-directed RNA polymerase subunit B
rifcsphigho2_01_scaffold_5837_22
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

17942..20404
-----------------
DNA (2463bp)
protein (821aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV
DNA-directed RNA polymerase, subunit A Tax=CG_Aenigma_01
rifcsphigho2_01_scaffold_5837_23
unknown

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20404..20631
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_24
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

20651..21751
-----------------
DNA (1101bp)
protein (367aa)
DNA-directed RNA polymerase subunit A''; K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] Tax=CG_Aenigma_01
DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S667_METSF
DNA-directed RNA polymerase, subunit A''
rifcsphigho2_01_scaffold_5837_25
unknown

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21977..22219
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5837_26
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

22235..22639
-----------------
DNA (405bp)
protein (135aa)
NusA family KH domain protein n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UV47_META3
NusA family KH domain protein; K02600 N utilization substance protein A Tax=CG_Aenigma_01
transcription elongation factor NusA-like protein
rifcsphigho2_01_scaffold_5837_27
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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22972..23268
-----------------
DNA (297bp)
protein (99aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA
rps12P; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (
Displaying 27 items

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