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rifcsphigho2_01_scaffold_23815

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_23815_1
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

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1..870
-----------------
DNA (870bp)
protein (290aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G049_9DELT
2-hydroxy-3-oxopropionate reductase
rifcsphigho2_01_scaffold_23815_2
unknown

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comp(875..1366)
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23815_3
Acinetobacter schindleri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1432..2043
-----------------
DNA (612bp)
protein (204aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=4 Tax=Acinetobacter RepID=I4ZVD6_9GAMM
rifcsphigho2_01_scaffold_23815_4
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(2324..3880)
-----------------
DNA (1557bp)
protein (519aa)
histone acetyltransferase, ELP3 family (EC:2.3.1.48); K07739 elongator complex protein 3 [EC:2.3.1.48] id=18248934 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
histone acetyltransferase, ELP3 family (EC:2.3.1.48); K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=AR5
histone acetyltransferase, ELP3 family (EC:2.3.1.48)
rifcsphigho2_01_scaffold_23815_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4033..4569)
-----------------
DNA (537bp)
protein (179aa)
Putative uracil DNA glycosylase superfamily protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF13_NITGG
putative uracil DNA glycosylase superfamily protein
Putative uracil DNA glycosylase superfamily protein {ECO:0000313|EMBL:AIC14425.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
rifcsphigho2_01_scaffold_23815_6
AR5, Aenigmarchaeota, DPANN, Archaea

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4632..4937
-----------------
DNA (306bp)
protein (102aa)
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=18248183 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=AR5
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
rifcsphigho2_01_scaffold_23815_7
Pontibacillus halophilus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4937..5512
-----------------
DNA (576bp)
protein (192aa)
Hydrolase, NUDIX family n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J5_9FIRM
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KGX92240.1}; TaxID=1385510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus halophilus JSM 076056 =
ADP-ribose pyrophosphatase
rifcsphigho2_01_scaffold_23815_8
AR5, Aenigmarchaeota, DPANN, Archaea

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5493..6887
-----------------
DNA (1395bp)
protein (465aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-) Tax=AR5
glutamyl-tRNA(Gln) amidotransferase, A subunit; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5042237 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
rifcsphigho2_01_scaffold_23815_9

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6884..7447
-----------------
DNA (564bp)
protein (188aa)
GCN5-related N-acetyltransferase id=4203363 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Acetyltransferase {ECO:0000313|EMBL:KHO48190.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
acetyltransferase
rifcsphigho2_01_scaffold_23815_10
AR5, Aenigmarchaeota, DPANN, Archaea

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7444..8058
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein id=18248186 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
HAD-superfamily hydrolase, subfamily IA, variant 3
rifcsphigho2_01_scaffold_23815_11
RHI_SM2F11_42_22, SM2F11, Bacteria

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8055..8813
-----------------
DNA (759bp)
protein (253aa)
Inositol-phosphate phosphatase (EC:3.1.3.25) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
histidinol-phosphate phosphatase, putative n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49DC
hypothetical protein
rifcsphigho2_01_scaffold_23815_12
AR5, Aenigmarchaeota, DPANN, Archaea

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8819..10195
-----------------
DNA (1377bp)
protein (459aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5042240 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=AR5
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.7)
rifcsphigho2_01_scaffold_23815_13
unknown

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comp(10196..10423)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23815_14
unknown

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comp(10428..10598)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23815_15

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comp(10629..10961)
-----------------
DNA (333bp)
protein (111aa)
Putative uncharacterized protein id=4203301 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO46323.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_01_scaffold_23815_16
AR4, Woesearchaeaota, DPANN, Archaea

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comp(10946..11194)
-----------------
DNA (249bp)
protein (83aa)
Transcriptional regulator, AbrB family id=4203302 bin=PER_GWC2_41_7 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
AbrB family transcriptional regulator
AbrB family transcriptional regulator Tax=AR4
rifcsphigho2_01_scaffold_23815_17
unknown

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11428..12267
-----------------
DNA (840bp)
protein (280aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23815_18
unknown

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12324..12875
-----------------
DNA (552bp)
protein (184aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23815_19
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

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12908..13546
-----------------
DNA (639bp)
protein (213aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydroge
Endonuclease III n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V3E2_9AQUI
nth; endonuclease III-like protein
rifcsphigho2_01_scaffold_23815_20
AR5, Aenigmarchaeota, DPANN, Archaea

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13558..14193
-----------------
DNA (636bp)
protein (212aa)
zinc/iron permease id=18248198 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
zinc/iron permease Tax=AR5
hypothetical protein
Displaying 20 items

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