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rifcsphigho2_01_scaffold_20561

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_20561_1
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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2..259
-----------------
DNA (258bp)
protein (86aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
adenylosuccinate lyase (EC:4.3.2.2)
adenylosuccinate lyase Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
rifcsphigho2_01_scaffold_20561_2
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(490..1275)
-----------------
DNA (786bp)
protein (262aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q0X0_METMZ
DNA polymerase IV {ECO:0000313|EMBL:KKH45250.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H
rifcsphigho2_01_scaffold_20561_3
unknown

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comp(1316..1555)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20561_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(1543..2538)
-----------------
DNA (996bp)
protein (332aa)
O-sialoglycoprotein endopeptidase; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RBG_16_Micrarchaeota_36_9_curated
O-sialoglycoprotein endopeptidase; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein id=5040675 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
protein kinase
rifcsphigho2_01_scaffold_20561_5
unknown

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comp(2572..2802)
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20561_6
unknown

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comp(3121..3369)
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20561_7
unknown

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comp(3379..3534)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20561_8
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(3595..3852)
-----------------
DNA (258bp)
protein (86aa)
rps27AE; 30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae id=18248955 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rps27AE; 30S ribosomal protein S27ae; K02977 small subunit ribosomal protein S27Ae Tax=AR5
rps27AE; 30S ribosomal protein S27ae
rifcsphigho2_01_scaffold_20561_9
unknown

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comp(3855..4082)
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20561_10

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comp(4089..4583)
-----------------
DNA (495bp)
protein (165aa)
seg id=18248956 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Seg {ECO:0000313|EMBL:KHO47791.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsphigho2_01_scaffold_20561_11
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4602..5108)
-----------------
DNA (507bp)
protein (169aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] Tax=AR5
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=18248958 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
DNA-directed RNA polymerase (EC:2.7.7.6)
rifcsphigho2_01_scaffold_20561_12

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comp(5268..7226)
-----------------
DNA (1959bp)
protein (653aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
hppA; membrane-bound proton-translocating pyrophosphatase id=18248959 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
potassium transporter
rifcsphigho2_01_scaffold_20561_13
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(7307..7663)
-----------------
DNA (357bp)
protein (119aa)
alias=gwa2_scaffold_1239_46 id=18248960 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_1239_46 Tax=AR5
rifcsphigho2_01_scaffold_20561_14
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(7660..8175)
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein Tax=CG_Woesearch_01
Putative uncharacterized protein id=1960825 bin=GWE2_Clostridiales_32_10 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
hypothetical protein
rifcsphigho2_01_scaffold_20561_15
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(8616..9023)
-----------------
DNA (408bp)
protein (136aa)
deoxyribonuclease/rho motif-related TRAM id=18248961 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
deoxyribonuclease/rho motif-related TRAM Tax=AR5
deoxyribonuclease/rho motif-related TRAM
rifcsphigho2_01_scaffold_20561_16
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9170..9784)
-----------------
DNA (615bp)
protein (205aa)
Ala-tRNA(Pro) hydrolase {ECO:0000313|EMBL:ABK15373.1}; EC=3.1.1.- {ECO:0000313|EMBL:ABK15373.1};; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Me
Ala-tRNA(Pro) hydrolase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9J9_METTP
threonyl/alanyl tRNA synthetase, SAD
Displaying 16 items

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