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rifcsphigho2_01_scaffold_47378

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_47378_1

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comp(3..263)
-----------------
DNA (261bp)
protein (87aa)
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor id=5044451 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Transcription elongation factor {ECO:0000313|EMBL:KHO48387.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO48387.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DNA-directed RNA polymerase, subunit m (EC:2.7.7.6)
rifcsphigho2_01_scaffold_47378_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(260..1384)
-----------------
DNA (1125bp)
protein (375aa)
STE24 endopeptidase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AL94_IGNAJ
STE24 endopeptidase
STE24 endopeptidase {ECO:0000313|EMBL:AFH49751.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium al
rifcsphigho2_01_scaffold_47378_3
unknown

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1474..1737
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsphigho2_01_scaffold_47378_4

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comp(1741..2046)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein id=18248509 bin=AR5_curated_draft species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48512.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
aromatic ring hydroxylating enzyme
rifcsphigho2_01_scaffold_47378_5
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2084..2560)
-----------------
DNA (477bp)
protein (159aa)
coiled-coil 3..24 Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
coiled-coil 3..24 id=13489 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
rifcsphigho2_01_scaffold_47378_6
CG_Woesearch_02, Woesearchaeota, Archaea

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2685..3620
-----------------
DNA (936bp)
protein (312aa)
calcium/cation antiporter; K07301 inner membrane protein Tax=CG_Woesearch_02
K+-dependent Na+/Ca+ exchanger related-protein id=5800688 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_47378_7
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(3938..4315)
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RD95_METP4
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_01_scaffold_47378_8
AR19, Pacearchaeaota, DPANN, Archaea

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comp(4321..4653)
-----------------
DNA (333bp)
protein (111aa)
Tax=AR19
rifcsphigho2_01_scaffold_47378_9

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comp(4802..5212)
-----------------
DNA (411bp)
protein (137aa)
transcription termination factor Tfs; K03057 transcription elongation factor id=18248397 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Transcription elongation factor {ECO:0000313|EMBL:KHO48400.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
transcription termination factor Tfs
rifcsphigho2_01_scaffold_47378_10
unknown

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5328..5468
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

Displaying 10 items

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