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rifcsphigho2_01_scaffold_11483_24

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Aenigmarchaeota_AR5_44_11

near complete RP 31 / 55 MC: 8 BSCG 19 / 51 MC: 2 ASCG 34 / 38 MC: 1
Location: 15885..16838

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5040555 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version! similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 317.0
  • Bit_score: 238
  • Evalue 8.80e-60
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO47664.1}; EC=4.2.1.70 {ECO:0000313|EMBL:KHO47664.1};; EC=5.4.99.27 {ECO:0000313|EMBL:KHO47664.1};; TaxID=1579367 species="Archaea.;" source="archaeon similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 317.0
  • Bit_score: 238
  • Evalue 1.20e-59
truD; tRNA pseudouridine synthase D (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 257.0
  • Bit_score: 106
  • Evalue 1.50e-20

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Taxonomy

archaeon GW2011_AR5 → Archaea

Sequences

DNA sequence
Length: 954
ATGCGCACCAAAAGCCTGATAGAAAAGCCTGAACACTTTGTAGTTCATGAGATCATAGATGACAAATTCACAAGACTATTTTCCAGAACATCAAAGGGCGTTCAAAAGATAGAAAAGAAATACACGCTGTATATCATGAAAAAGACCGGCACAACGACTCAGGCTGCGCTGGCAACGGTCGCAAAATATCTTGATACCAGCAGGGATTCCATTGGCTATGCTGGCCTTAAAGACAAGTTTGCTGTAACAACACAGCACATTACGCTCAAAGATGCAGATTTCGAGGAACTTGATCTGGGAAACGTCCAGCTTTTCAAACTTGGGTATACAGACAAGCAGATATCAGTGGGCAGCCTCAAAGGAAATCATTTTGTCATAACGCTCAGGAGAACCCGTGTTAAGGATCCCGGCAGTGCTGTAAGAAAGATAAACCAGGAAGGCTTCCCGAACTTCTTTGGGGAACAGAGATTTGGCAACAGGTGCAACAACCATATAATCGGAGGGCTTCTGGTCAAAAGAGATTTCAAAGAAGCGCTAAAGCTGATAAATGGGAATGAGAAGAACAAATTCAAGAAAATTGATGAAGTGGAAAAGAGAAGATTGAAATTCTTCGTCCATGCCTACCAGTCATGGATTTTCAATACCGCGCTGGGCGAATGCATCAAGAAAAAGATTGCGGTGAAAAACCTCCGGATTGTTGGGTGCAATACTGTATTGCGCAATAGTGCAGCCGACAAGCTCTTGTCTAAAATACTGGCCAAGCAGGGCGTGAAACCGCCCGATTTCAAGATACACGAACTAAAACTGTCTTGCAGCGGAACTCAAAGAGCCGCTTTTGTGAAAACGGAAATAAAATTCAATAGAATTGATGGCTATATTCAGTTATATTTTACACTTCCGAAAGGAAGCTATGCAACTGTTGTTCTGGCACAGCTGATTAAGGGTTCATCTTAG
PROTEIN sequence
Length: 318
MRTKSLIEKPEHFVVHEIIDDKFTRLFSRTSKGVQKIEKKYTLYIMKKTGTTTQAALATVAKYLDTSRDSIGYAGLKDKFAVTTQHITLKDADFEELDLGNVQLFKLGYTDKQISVGSLKGNHFVITLRRTRVKDPGSAVRKINQEGFPNFFGEQRFGNRCNNHIIGGLLVKRDFKEALKLINGNEKNKFKKIDEVEKRRLKFFVHAYQSWIFNTALGECIKKKIAVKNLRIVGCNTVLRNSAADKLLSKILAKQGVKPPDFKIHELKLSCSGTQRAAFVKTEIKFNRIDGYIQLYFTLPKGSYATVVLAQLIKGSS*