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rifcsphigho2_01_scaffold_11483

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_11483_1
unknown

Not on your lists

2..391
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_2
unknown

Not on your lists

401..1291
-----------------
DNA (891bp)
protein (297aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_3
unknown

Not on your lists

1301..1462
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_4
unknown

Not on your lists

1525..1662
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

1835..3559
-----------------
DNA (1725bp)
protein (575aa)
transmembrane_regions id=18248853 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsphigho2_01_scaffold_11483_6
unknown

Not on your lists

3598..4044
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_7
unknown

Not on your lists

4044..4871
-----------------
DNA (828bp)
protein (276aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_8
unknown

Not on your lists

5041..5805
-----------------
DNA (765bp)
protein (255aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_9

Not on your lists

5815..7221
-----------------
DNA (1407bp)
protein (469aa)
transmembrane_regions id=5040575 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Uncharacterized protein {ECO:0000313|EMBL:KHO47684.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rifcsphigho2_01_scaffold_11483_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(7253..7663)
-----------------
DNA (411bp)
protein (137aa)
transmembrane_regions id=18248848 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
transmembrane_regions Tax=AR5
rifcsphigho2_01_scaffold_11483_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

7715..8095
-----------------
DNA (381bp)
protein (127aa)
id=3400147 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
transmembrane_regions Tax=AR5
rifcsphigho2_01_scaffold_11483_12

Not on your lists

comp(8092..9105)
-----------------
DNA (1014bp)
protein (338aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 id=3400145 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
5'-3' exonuclease (including N-terminal domain of PolI)
rifcsphigho2_01_scaffold_11483_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9182..9631
-----------------
DNA (450bp)
protein (150aa)
Transcription regulator, MarR family protein id=3400140 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein Tax=AR5
hypothetical protein
rifcsphigho2_01_scaffold_11483_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(9699..9953)
-----------------
DNA (255bp)
protein (85aa)
translation elongation factor aEF-1 beta; K03232 elongation factor 1-beta id=5040569 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ef1B; elongation factor EF-1 beta subunit Tax=AR5
ef1B; elongation factor EF-1 beta subunit
rifcsphigho2_01_scaffold_11483_15
unknown

Not on your lists

comp(9955..10278)
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_16
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(10695..11522)
-----------------
DNA (828bp)
protein (276aa)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHI8_THEBM
4-hydroxybenzoate polyprenyltransferase
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:ADT84315.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus
rifcsphigho2_01_scaffold_11483_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11610..12335
-----------------
DNA (726bp)
protein (242aa)
Glycosyl transferase family 2 id=3400133 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
family 2 glycosyl transferase Tax=AR5
family 2 glycosyl transferase
rifcsphigho2_01_scaffold_11483_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

12343..12861
-----------------
DNA (519bp)
protein (173aa)
UPF0290 protein OCC_07371 id=3400131 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein Tax=AR5
hypothetical protein
rifcsphigho2_01_scaffold_11483_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(12866..13372)
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein id=18248268 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
hypothetical protein
rifcsphigho2_01_scaffold_11483_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(13382..13723)
-----------------
DNA (342bp)
protein (114aa)
transcriptional regulator
transcriptional regulator id=5240583 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
transcriptional regulator Tax=AR10
rifcsphigho2_01_scaffold_11483_21
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

13802..14881
-----------------
DNA (1080bp)
protein (360aa)
Myo-inositol-1-phosphate synthase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S0N6_DESTD
Myo-inositol-1-phosphate synthase
Myo-inositol-1-phosphate synthase {ECO:0000313|EMBL:ADY73839.1}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacteriu
rifcsphigho2_01_scaffold_11483_22

Not on your lists

14884..15489
-----------------
DNA (606bp)
protein (202aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] id=5240580 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AJF59573.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AJF59573.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR
rifcsphigho2_01_scaffold_11483_23
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15516..15866
-----------------
DNA (351bp)
protein (117aa)
aminoacyl-tRNa hydrolase (EC:3.1.1.29)
Aminoacyl-tRNA hydrolase {ECO:0000313|EMBL:ADI73218.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ADI73218.1};; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae
Peptidyl-tRNA hydrolase id=3400127 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_11483_24

Not on your lists

15885..16838
-----------------
DNA (954bp)
protein (318aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5040555 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO47664.1}; EC=4.2.1.70 {ECO:0000313|EMBL:KHO47664.1};; EC=5.4.99.27 {ECO:0000313|EMBL:KHO47664.1};; TaxID=1579367 species="Archaea.;" source="archaeon
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
rifcsphigho2_01_scaffold_11483_25
unknown

Not on your lists

comp(16830..17096)
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11483_26
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(17045..17731)
-----------------
DNA (687bp)
protein (229aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
rifcsphigho2_01_scaffold_11483_27
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

17777..19051
-----------------
DNA (1275bp)
protein (425aa)
Glycosyl transferase, group 2 family protein/polysaccharide deacetylase family protein id=3400125 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
group-specific protein Tax=AR5
Glycosyltransferase involved in cell wall biogenesis
rifcsphigho2_01_scaffold_11483_28

Not on your lists

comp(19060..20346)
-----------------
DNA (1287bp)
protein (429aa)
glycosyltransferase id=5040560 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Glycosyltransferase {ECO:0000313|EMBL:KHO47669.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
glucomannan 4-beta-mannosyltransferase
rifcsphigho2_01_scaffold_11483_29

Not on your lists

comp(20639..22048)
-----------------
DNA (1410bp)
protein (470aa)
Putative uncharacterized protein n=5 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAF4_9EURY id=5103320 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62601.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_11483_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

22147..22380
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein id=18248192 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein Tax=AR5
putative protein family UPF0150
Displaying items 1-30 of 33 in total

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