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rifcsphigho2_01_scaffold_15009_13

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_29_23

partial RP 25 / 55 MC: 3 BSCG 17 / 51 ASCG 23 / 38 MC: 3
Location: comp(8083..8337)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator, SpoVT/AbrB family n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JI32_THEKO similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 81.0
  • Bit_score: 61
  • Evalue 6.70e-07
looped-hinge helix DNA binding domain, AbrB family Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 81.0
  • Bit_score: 63
  • Evalue 1.90e-07
SpoVT/AbrB family transcription regulator similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 81.0
  • Bit_score: 61
  • Evalue 1.90e-07

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Taxonomy

RHI_RIF_OD1_01_48_17 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGTAACAATAACAAAAATAAGTTCGAAAGGCCAGGTAGTAATTCCGTTAGAGTTAAGAGAAAAAATGAATTTAGAAGAAGGAAATTTATTAATTGTTTCTGATAATGGTAATTCAATTTGCATGAAAAAAATTGAATTACCTAAAATAAAATCATGGGGTGAAGTAACAAAACCTTTTAGAGAAGCAGTAAAAAAATCTAATTTTTCAAAGGATGACTTAAAAAAGCTGGTGGAAGAATCAAGAATTAGATAA
PROTEIN sequence
Length: 85
MVTITKISSKGQVVIPLELREKMNLEEGNLLIVSDNGNSICMKKIELPKIKSWGEVTKPFREAVKKSNFSKDDLKKLVEESRIR*