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rifcsphigho2_01_scaffold_17289

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_01_scaffold_17289_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(190..552)
-----------------
DNA (363bp)
protein (121aa)
Probable ribonuclease VapC n=1 Tax=Thermococcus sp. AM4 RepID=B7R4X0_9EURY id=5103339 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative ribonuclease VapC
rifcsphigho2_01_scaffold_17289_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(545..769)
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein id=4379348 bin=PER_GWC2_41_7 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_17289_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(918..3602)
-----------------
DNA (2685bp)
protein (895aa)
Cadherin-like domain-containing protein
Uncharacterized protein id=5040550 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rifcsphigho2_01_scaffold_17289_4
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

4065..4424
-----------------
DNA (360bp)
protein (120aa)
Regulatory protein ArsR n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXD7_FERPA
regulatory protein ArsR
rifcsphigho2_01_scaffold_17289_5
unknown

Not on your lists

4580..4780
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17289_6
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4700..7672)
-----------------
DNA (2973bp)
protein (991aa)
parallel beta-helix repeat-containing protein id=5048007 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
parallel beta-helix repeat-containing protein
rifcsphigho2_01_scaffold_17289_7
GWA2_OD1_43_9, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7733..8014)
-----------------
DNA (282bp)
protein (94aa)
rifcsphigho2_01_scaffold_17289_8
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

8290..9846
-----------------
DNA (1557bp)
protein (519aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D11F
Polysaccharide biosynthesis protein
rifcsphigho2_01_scaffold_17289_9
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

9879..10355
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein id=5051057 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Methyltransferase type 11
rifcsphigho2_01_scaffold_17289_10
unknown

Not on your lists

comp(10376..11305)
-----------------
DNA (930bp)
protein (310aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17289_11
unknown

Not on your lists

comp(11302..11958)
-----------------
DNA (657bp)
protein (219aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17289_12
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(12034..14379)
-----------------
DNA (2346bp)
protein (782aa)
GDP-mannose 4,6-dehydratase n=1 Tax=Bacillus sp. L1(2012) RepID=UPI0003485DD5
gdp-mannose 4,6-dehydratase
rifcsphigho2_01_scaffold_17289_13
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(14391..15308)
-----------------
DNA (918bp)
protein (306aa)
rfaD; ADP-glyceromanno-heptose 6-epimerase (EC:5.1.3.20); K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] id=5098278 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
nad-dependent epimerase/dehydratase
rifcsphigho2_01_scaffold_17289_14
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(15412..15867)
-----------------
DNA (456bp)
protein (152aa)
NUDIX hydrolase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HQC1_CYAP4
NUDIX hydrolase
rifcsphigho2_01_scaffold_17289_15
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

15948..17165
-----------------
DNA (1218bp)
protein (406aa)
glycosyltransferase id=2551 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
glycosyltransferase
rifcsphigho2_01_scaffold_17289_16
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

17275..18477
-----------------
DNA (1203bp)
protein (401aa)
Lipopolysaccharide heptosyltransferase II id=2933820 bin=GWC2_OP3-like_45_7 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
glycosyl transferase family protein
rifcsphigho2_01_scaffold_17289_17
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(18491..19336)
-----------------
DNA (846bp)
protein (282aa)
Glycosyltransferase (Fragment) n=1 Tax=uncultured bacterium RepID=K2E7R8_9BACT
hypothetical protein
rifcsphigho2_01_scaffold_17289_18

Not on your lists

19387..20007
-----------------
DNA (621bp)
protein (207aa)
Putative uncharacterized protein id=3730467 bin=GWF2_Nitrospirae_44_13 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
rifcsphigho2_01_scaffold_17289_19
R_OP11_Curtissbacteria_41_18, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

20101..21198
-----------------
DNA (1098bp)
protein (366aa)
Glycosyltransferase (EC:2.4.1.-)
Putative Glycosyltransferase SypH n=4 Tax=Vibrio nigripulchritudo RepID=U4DP41_9VIBR
rifcsphigho2_01_scaffold_17289_20
unknown

Not on your lists

comp(21314..21694)
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

Displaying 20 items

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