ggKbase home page

rifcsphigho2_01_scaffold_12411

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_01_scaffold_12411_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(106..465)
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein id=5050138 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_12411_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(462..734)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein id=5050137 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_12411_3
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

865..2181
-----------------
DNA (1317bp)
protein (439aa)
rifcsphigho2_01_scaffold_12411_4
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(2205..2723)
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI00037CAB62
rifcsphigho2_01_scaffold_12411_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2883..3632)
-----------------
DNA (750bp)
protein (250aa)
nuclease n=1 Tax=Pseudomonas fluorescens RepID=UPI00037E80B7
nuclease
rifcsphigho2_01_scaffold_12411_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(3648..4121)
-----------------
DNA (474bp)
protein (158aa)
Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HUM5_9FIRM id=132083 bin=ACD80 species=Anaerococcus vaginalis genus=Anaerococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD80 organism_group=SR1
YbaK/prolyl-tRNA synthetase associated region
rifcsphigho2_01_scaffold_12411_7
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

4172..5155
-----------------
DNA (984bp)
protein (328aa)
Thioredoxin reductase (TrxB-3) n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A2G0_FERFK id=5103529 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Thioredoxin reductase TrxB-3
rifcsphigho2_01_scaffold_12411_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

5214..5672
-----------------
DNA (459bp)
protein (153aa)
rifcsphigho2_01_scaffold_12411_9
unknown

Not on your lists

5677..6237
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12411_10

Not on your lists

6234..6755
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein id=2175630 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
rifcsphigho2_01_scaffold_12411_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

6904..9885
-----------------
DNA (2982bp)
protein (994aa)
hypothetical protein id=5049573 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_12411_12
unknown

Not on your lists

9943..10104
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

rifcsphigho2_01_scaffold_12411_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

10101..11405
-----------------
DNA (1305bp)
protein (435aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382D20B
Type II secretion system F domain protein
rifcsphigho2_01_scaffold_12411_14
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

11462..12331
-----------------
DNA (870bp)
protein (290aa)
type II secretion system F domain-containing protein; K07333 archaeal flagellar protein FlaJ id=5050378 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
type II secretion system protein
Displaying 14 items

View Taxonomy