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rifcsphigho2_01_scaffold_24187

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_24187_1
unknown

Not on your lists

comp(2..262)
DNA (261bp) protein (87aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24187_2
unknown

Not on your lists

comp(201..392)
DNA (192bp) protein (64aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24187_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(628..1719)
DNA (1092bp) protein (364aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Pacearch_06
Cell division protein FtsZ
rifcsphigho2_01_scaffold_24187_4
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(1771..2433)
DNA (663bp) protein (221aa)
FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=sediment metagenome RepID=D9PEV4_9ZZZZ
peptidyl-prolyl cis-trans isomerase Tax=CG_Pacearch_02
peptidylprolyl isomerase FKBP-type
rifcsphigho2_01_scaffold_24187_5
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


2681..3073
DNA (393bp) protein (131aa)
Translation initiation factor 5A n=1 Tax=sediment metagenome RepID=D9PEV2_9ZZZZ
translation initiation factor IF-5A; K03263 translation initiation factor 5A Tax=CG_Pacearch_02
Translation initiation factor 5A
rifcsphigho2_01_scaffold_24187_6
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

3259..4671
DNA (1413bp) protein (471aa)
Peptidase M50 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFS7_9EURY id=5103023 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
peptidase M50 Tax=CG_Pacearch_02
Peptidase M50
rifcsphigho2_01_scaffold_24187_7
unknown

Not on your lists

4729..4875
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24187_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(4995..5348)
DNA (354bp) protein (118aa)
hypothetical protein
id=5103013 Tax=CG_Pacearch_03
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_24187_9
unknown

Not on your lists

5399..6139
DNA (741bp) protein (247aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24187_10
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

6169..6621
DNA (453bp) protein (151aa)
hypothetical protein
id=5800786 Tax=CG_Pacearch_03
id=5800786 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_24187_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

6642..7076
DNA (435bp) protein (145aa)
MgtC family magnesium (Mg2+) transporter n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR61_9ARCH
putative membrane protein
MgtC family magnesium (Mg2+) transporter {ECO:0000313|EMBL:CDI05206.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
rifcsphigho2_01_scaffold_24187_12
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


7166..7783
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E9331
50S ribosomal protein L1 Tax=CG_Pacearch_02
50S ribosomal protein L1
rifcsphigho2_01_scaffold_24187_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


7784..8584
DNA (801bp) protein (267aa)
50S ribosomal protein L10 n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3L7_METSW
rplP0; acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 Tax=CG_Pacearch_03
acidic ribosomal protein P0-like protein
rifcsphigho2_01_scaffold_24187_14
unknown

Not on your lists

8584..8754
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24187_15
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8971..9504
DNA (534bp) protein (178aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KGK85996.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
ADP-ribose pyrophosphatase id=15189446 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
hypothetical protein
rifcsphigho2_01_scaffold_24187_16
unknown

Not on your lists

9536..9949
DNA (414bp) protein (138aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24187_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10009..10482
DNA (474bp) protein (158aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein id=51423 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
rifcsphigho2_01_scaffold_24187_18
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(10479..10760)
DNA (282bp) protein (94aa)
Tax=CG_Pacearch_04
rifcsphigho2_01_scaffold_24187_19
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(10811..12283)
DNA (1473bp) protein (491aa)
thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=CG_Pacearch_03
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5043588 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
deoA-1; thymidine phosphorylase (EC:2.4.2.4)
rifcsphigho2_01_scaffold_24187_20
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(12312..13346)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
rifcsphigho2_01_scaffold_24187_21
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

13436..14137
DNA (702bp) protein (234aa)
id=5048829 Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_24187_22
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14189..14542
DNA (354bp) protein (118aa)
Tax=RBG_16_Pacearchaeota_35_8_curated
rifcsphigho2_01_scaffold_24187_23

Not on your lists


14840..15703
DNA (864bp) protein (288aa)
50S ribosomal protein L3 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXT2_FERPA id=5103252 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L3P {ECO:0000313|EMBL:AJS12506.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3
rifcsphigho2_01_scaffold_24187_24

Not on your lists


15700..16467
DNA (768bp) protein (256aa)
50S ribosomal protein L4 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ id=5103253 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal protein L4 {ECO:0000313|EMBL:AJS12505.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
rifcsphigho2_01_scaffold_24187_25
unknown

Not on your lists

16464..16634
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24187_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


16628..16867
DNA (240bp) protein (80aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23P; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Pacearchaeota_36_9_curated
50S ribosomal protein L23P
rifcsphigho2_01_scaffold_24187_27
unknown

Not on your lists

16867..17196
DNA (330bp) protein (110aa)

This feature has no annotations

rifcsphigho2_01_scaffold_24187_28

Not on your lists


17197..17898
DNA (702bp) protein (234aa)
Ribosomal protein L2 {ECO:0000313|EMBL:AJS12504.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L2
rifcsphigho2_01_scaffold_24187_29

Not on your lists


17898..18296
DNA (399bp) protein (133aa)
30S ribosomal protein S19P n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BJ21_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
SSU ribosomal protein S19P
rifcsphigho2_01_scaffold_24187_30

Not on your lists


18298..18912
DNA (615bp) protein (205aa)
50S ribosomal protein L22P n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB23_9ARCH
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22
Displaying items 1-30 of 38 in total

View Taxonomy