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rifcsphigho2_01_scaffold_6195

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_6195_1

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50..772
-----------------
DNA (723bp)
protein (241aa)
TraB family protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSP1_METIM id=5103107 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TraB family protein
TraB family protein {ECO:0000313|EMBL:AJF62388.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6195_2
AR4, Woesearchaeaota, DPANN, Archaea

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773..1480
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000370CCDC
Peptidase M50 Tax=AR4
rifcsphigho2_01_scaffold_6195_3
unknown

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comp(1469..1732)
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CFA55
rifcsphigho2_01_scaffold_6195_4

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1773..3311
-----------------
DNA (1539bp)
protein (513aa)
Helicase domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQU8_ARCVS id=5103105 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Helicase protein
Helicase protein {ECO:0000313|EMBL:AJF62386.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6195_5
unknown

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3283..3930
-----------------
DNA (648bp)
protein (216aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZK2_METFV id=5103104 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD/DEAH box helicase domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZK2_METFV Tax=AR20
DEAD/DEAH box helicase protein
rifcsphigho2_01_scaffold_6195_6
AR18, Woesearchaeaota, DPANN, Archaea

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comp(3925..4461)
-----------------
DNA (537bp)
protein (179aa)
integral membrane transport protein; K01975 2'-5' RNA ligase [EC:6.5.1.-] id=5046832 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
integral membrane transport protein; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=AR18
2'-5' RNA ligase
rifcsphigho2_01_scaffold_6195_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4458..5234)
-----------------
DNA (777bp)
protein (259aa)
arginase (EC:3.5.3.1); K01476 arginase [EC:3.5.3.1] Tax=CG_Woesearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C9408
Arginase
rifcsphigho2_01_scaffold_6195_8
CG_Pacearch_05, Pacearchaeota, Archaea

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5310..6332
-----------------
DNA (1023bp)
protein (341aa)
YARS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_Pacearch_05
tyrosyl-tRNA synthetase (EC:6.1.1.1)
PREDICTED: tyrosine--tRNA ligase, cytoplasmic n=1 Tax=Saimiri boliviensis boliviensis RepID=UPI00027FAB01
rifcsphigho2_01_scaffold_6195_9

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6419..6772
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003805C50
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62379.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6195_10

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6765..7958
-----------------
DNA (1194bp)
protein (398aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62377.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6195_11
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(7950..12950)
-----------------
DNA (5001bp)
protein (1667aa)
DNA polymerase II large subunit; K02322 DNA polymerase II large subunit [EC:2.7.7.7] Tax=CG_Pacearch_05
DNA polymerase II large subunit (EC:2.7.7.7)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037716FE
rifcsphigho2_01_scaffold_6195_12
unknown

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comp(12943..14592)
-----------------
DNA (1650bp)
protein (550aa)
NEQ240 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR7_NANEQ id=5103157 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
NEQ240 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR7_NANEQ Tax=AR20
hypothetical protein
rifcsphigho2_01_scaffold_6195_13

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comp(14592..15800)
-----------------
DNA (1209bp)
protein (403aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037374F8
ORC1-type DNA replication protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6195_14
CG_Woesearch_02, Woesearchaeota, Archaea

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16338..16601
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003677CBE
hypothetical protein Tax=CG_Woesearch_02
PRC-barrel protein
rifcsphigho2_01_scaffold_6195_15
unknown

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16634..18511
-----------------
DNA (1878bp)
protein (626aa)
ATP-dependent protease Lon n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HMZ6_PYRSN id=5103160 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ATP-dependent protease Lon n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HMZ6_PYRSN Tax=AR20
ATP-dependent protease Lon
rifcsphigho2_01_scaffold_6195_16
Bacillus pseudomycoides, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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18534..20186
-----------------
DNA (1653bp)
protein (551aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=527000 species="Bacteria; Firm
Arginine--tRNA ligase n=1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BJW6_9BACI
rifcsphigho2_01_scaffold_6195_17

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20230..20658
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein
id=5103162 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62443.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6195_18
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(20655..21359)
-----------------
DNA (705bp)
protein (235aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
phosphoesterase; K06953 Tax=CG_Woesearch_02
Phosphoesterase
rifcsphigho2_01_scaffold_6195_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(21362..21913)
-----------------
DNA (552bp)
protein (184aa)
Transcriptional regulator, Asnc family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6C4_METCZ
AsnC/Lrp family transcriptional regulator Tax=RBG_16_Euryarchaeota_41_19_curated
transcriptional regulator, Asnc family
rifcsphigho2_01_scaffold_6195_20
unknown

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22047..22607
-----------------
DNA (561bp)
protein (187aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW id=5103548 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW Tax=AR20
Iron-sulfur cluster assembly accessory protein
rifcsphigho2_01_scaffold_6195_21
GWA1_OD1_36_12, Parcubacteria, Bacteria

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22607..25156
-----------------
DNA (2550bp)
protein (850aa)
Uncharacterized protein n=6 Tax=Mycobacterium tuberculosis RepID=H8HY99_MYCTU
Uncharacterized protein {ECO:0000313|EMBL:KKP92458.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
hypothetical protein
rifcsphigho2_01_scaffold_6195_22
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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25160..26365
-----------------
DNA (1206bp)
protein (402aa)
Iron-regulated ABC transporter permease protein SufD n=1 Tax=Natronococcus occultus SP4 RepID=L0JXV3_9EURY
SufBD protein {ECO:0000313|EMBL:KKQ17613.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
SufB domain-containing protein
rifcsphigho2_01_scaffold_6195_23
AR17, Woesearchaeaota, DPANN, Archaea

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26349..27578
-----------------
DNA (1230bp)
protein (410aa)
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0IX30_AMPXN rbh
Cysteine desulfurase Tax=AR17
rifcsphigho2_01_scaffold_6195_24
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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27578..27970
-----------------
DNA (393bp)
protein (131aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUE0_HERA2
NifU family SUF system FeS assembly protein
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ABX03059.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="H
rifcsphigho2_01_scaffold_6195_25
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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27948..28694
-----------------
DNA (747bp)
protein (249aa)
FeS assembly ATPase SufC Tax=GWA1_Berkelbacteria_36_10
sufC; putative ATP-dependent transporter SufC; K09013 Fe-S cluster assembly ATP-binding protein id=5046300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
FeS assembly ATPase SufC
rifcsphigho2_01_scaffold_6195_26
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

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comp(28691..28969)
-----------------
DNA (279bp)
protein (93aa)
Putative uncharacterized protein id=4759191 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
fes assembly suf system protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
metal-sulfur cluster biosynthetic enzyme
rifcsphigho2_01_scaffold_6195_27
unknown

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29055..29462
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein n=2 Tax=Cenarchaeum symbiosum RepID=O74050_CENSY id=5103566 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=2 Tax=Cenarchaeum symbiosum RepID=O74050_CENSY Tax=AR20
hypothetical protein
rifcsphigho2_01_scaffold_6195_28
unknown

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comp(29452..29934)
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DEE94
DEAD/H associated domain protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7W5_METSW Tax=AR20
DEAD/H associated protein
rifcsphigho2_01_scaffold_6195_29
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(30111..31997)
-----------------
DNA (1887bp)
protein (629aa)
DEAD/H associated domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Woesearch_02
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/H associated protein
rifcsphigho2_01_scaffold_6195_30
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32040..35252)
-----------------
DNA (3213bp)
protein (1071aa)
Heparinase II/III-like protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BSQ9_9GAMM
Heparinase II/III-like protein {ECO:0000313|EMBL:ESS67573.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyl
heparinase II/III family protein
Displaying items 1-30 of 52 in total

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