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rifcsphigho2_01_scaffold_9505

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_9505_1
unknown

Not on your lists

comp(2..145)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9505_2
CG_Pacearch_06, Pacearchaeota, Archaea

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155..1438
-----------------
DNA (1284bp)
protein (428aa)
ATP-dependent RNA helicase Tax=CG_Pacearch_06
Probable ATP-dependent RNA helicase id=5799626 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative ATP-dependent RNA helicase
rifcsphigho2_01_scaffold_9505_3
unknown

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1518..1991
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9505_4
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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2199..2732
-----------------
DNA (534bp)
protein (178aa)
Protein GrpE n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=GRPE_METST
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=CG_Aenigma_01
grpE; hypothetical protein
rifcsphigho2_01_scaffold_9505_5
CG_Woesearch_01, Woesearchaeota, Archaea

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2725..4557
-----------------
DNA (1833bp)
protein (611aa)
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Woesearch_01
Chaperone protein DnaK id=5799568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dnaK; molecular chaperone DnaK
rifcsphigho2_01_scaffold_9505_6
unknown

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4554..4883
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9505_7

Not on your lists

4928..6061
-----------------
DNA (1134bp)
protein (378aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5048313 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Molecular chaperone DnaJ {ECO:0000313|EMBL:KHO54031.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
chaperone protein DnaJ
rifcsphigho2_01_scaffold_9505_8
unknown

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comp(6134..6286)
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9505_9
unknown

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6390..7352
-----------------
DNA (963bp)
protein (321aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL Tax=AR20
SpoVT/AbrB protein
rifcsphigho2_01_scaffold_9505_10
unknown

Not on your lists

7383..8618
-----------------
DNA (1236bp)
protein (412aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9505_11
unknown

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comp(8743..9282)
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9505_12

Not on your lists

9374..10000
-----------------
DNA (627bp)
protein (209aa)
tdk; Thymidine kinase (EC:2.7.1.21)
Uncharacterized protein {ECO:0000313|EMBL:KKL72908.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Thymidine kinase id=2051091 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
rifcsphigho2_01_scaffold_9505_13

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10086..11057
-----------------
DNA (972bp)
protein (324aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003824DB2
putative bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein
Putative bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000313|EMBL:AJF62983.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_9505_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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11208..11810
-----------------
DNA (603bp)
protein (201aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_9505_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11797..12477
-----------------
DNA (681bp)
protein (227aa)
protein of unknown function (DUF1814)
Marine sediment metagenome DNA, contig: S01H1_L00161 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_9505_16
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

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12661..14121
-----------------
DNA (1461bp)
protein (487aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5046585 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
adenylosuccinate lyase (EC:4.3.2.2)
rifcsphigho2_01_scaffold_9505_17
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(14255..14578)
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRZ6_METMA
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
rifcsphigho2_01_scaffold_9505_18
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(14575..14817)
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
DoxX family protein id=5800422 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Displaying 18 items

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