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rifcsphigho2_01_scaffold_8620

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_01_scaffold_8620_1
R_RIF_OD1_13_49_12, RIF-OD1-13, Parcubacteria, Bacteria

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comp(1..1782)
-----------------
DNA (1782bp)
protein (594aa)
rifcsphigho2_01_scaffold_8620_2

Not on your lists

comp(1775..2845)
-----------------
DNA (1071bp)
protein (357aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=5241313 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_8620_3

Not on your lists

comp(2838..3782)
-----------------
DNA (945bp)
protein (315aa)
lipoate synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] id=5048735 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_8620_4
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(3733..3999)
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein, conserved id=133560 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
rifcsphigho2_01_scaffold_8620_5
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(4071..4829)
-----------------
DNA (759bp)
protein (253aa)
Ferredoxin:NADP+ oxidoreductase n=2 Tax=Hydrogenobacter thermophilus RepID=D3DIM8_HYDTT
Oxidoreductase FAD-binding domain-containing protein
rifcsphigho2_01_scaffold_8620_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4873..5910)
-----------------
DNA (1038bp)
protein (346aa)
Diaminopimelate decarboxylase id=5799972 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Orn/DAP/Arg decarboxylase 2
rifcsphigho2_01_scaffold_8620_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5903..6847)
-----------------
DNA (945bp)
protein (315aa)
deoxyhypusine synthase (EC:2.5.1.46)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003816BE3
rifcsphigho2_01_scaffold_8620_8
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(6974..7450)
-----------------
DNA (477bp)
protein (159aa)
NUDIX hydrolase n=1 Tax=uncultured bacterium RepID=K2DRC0_9BACT
NUDIX family hydrolase
rifcsphigho2_01_scaffold_8620_9

Not on your lists

comp(7501..7908)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
hypothetical protein
rifcsphigho2_01_scaffold_8620_10

Not on your lists

comp(7910..8164)
-----------------
DNA (255bp)
protein (85aa)
50S ribosomal protein L30e n=12 Tax=Sulfolobus RepID=RL30E_SULSO id=5103775 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30e
rifcsphigho2_01_scaffold_8620_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8161..9309)
-----------------
DNA (1149bp)
protein (383aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5044120 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit A''
rifcsphigho2_01_scaffold_8620_12

Not on your lists

comp(9309..11882)
-----------------
DNA (2574bp)
protein (858aa)
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV id=5103777 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_8620_13

Not on your lists

comp(11884..13686)
-----------------
DNA (1803bp)
protein (601aa)
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR9_METFV id=5103778 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_8620_14

Not on your lists

comp(13688..15178)
-----------------
DNA (1491bp)
protein (497aa)
DNA-directed RNA polymerase n=6 Tax=Thermococcus RepID=Q5JE32_PYRKO id=5103779 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_8620_15
nanoarchaeote Nst1, Nanoarchaeota, Archaea

Not on your lists

comp(15168..15413)
-----------------
DNA (246bp)
protein (82aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH
rifcsphigho2_01_scaffold_8620_16
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15791..16432)
-----------------
DNA (642bp)
protein (214aa)
NADP oxidoreductase, coenzyme F420-dependent id=4642155 bin=GWF2_Ignavibacteria_35_20 species=Arthrobacter sp. genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
putative NADP oxidoreductase, coenzyme F420-dependent
rifcsphigho2_01_scaffold_8620_17
unknown

Not on your lists

comp(16593..17369)
-----------------
DNA (777bp)
protein (259aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8620_18
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

comp(17582..18355)
-----------------
DNA (774bp)
protein (258aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI00037E26ED
rifcsphigho2_01_scaffold_8620_19
unknown

Not on your lists

18414..20093
-----------------
DNA (1680bp)
protein (560aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8620_20
unknown

Not on your lists

20759..20971
-----------------
DNA (213bp)
protein (71aa)
UPF0150 protein AF_1072 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1072_ARCFU id=5103599 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_01_scaffold_8620_21
unknown

Not on your lists

20973..21200
-----------------
DNA (228bp)
protein (76aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVT8_9BACT id=5103600 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_01_scaffold_8620_22
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21282..27875)
-----------------
DNA (6594bp)
protein (2198aa)
Cell surface protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TMY7_METAC
surface layer protein B
Displaying 22 items

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