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rifcsphigho2_01_scaffold_23974

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_01_scaffold_23974_1
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37..624)
-----------------
DNA (588bp)
protein (196aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Thermincola potens (strain JR) RepID=D5XE40_THEPJ
diguanylate cyclase and metal dependent phosphohydrolase
rifcsphigho2_01_scaffold_23974_2

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701..1264
-----------------
DNA (564bp)
protein (188aa)
Putative transcriptional regulator, AsnC family id=5043628 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_23974_3
unknown

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1551..2753
-----------------
DNA (1203bp)
protein (401aa)
UPF0095 protein PYCH_02180 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AG81_PYRYC id=5103044 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_01_scaffold_23974_4
unknown

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2757..3119
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23974_5
AR18, Woesearchaeaota, DPANN, Archaea

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3151..3639
-----------------
DNA (489bp)
protein (163aa)
transmembrane_regions id=5044145 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_01_scaffold_23974_6
unknown

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3699..4016
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23974_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4305..5522)
-----------------
DNA (1218bp)
protein (406aa)
Putative uncharacterized protein id=3642882 bin=GWC2_Bacteroidetes_40_13 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
rifcsphigho2_01_scaffold_23974_8
unknown

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comp(5700..6428)
-----------------
DNA (729bp)
protein (243aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23974_9
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

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comp(6681..7052)
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FLQ3_9BACT
hypothetical protein
rifcsphigho2_01_scaffold_23974_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(7174..8172)
-----------------
DNA (999bp)
protein (333aa)
phosphate uptake regulator PhoU id=5048382 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_23974_11

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8393..9544
-----------------
DNA (1152bp)
protein (384aa)
Radical SAM n=1 Tax=Bacillus cereus Rock3-28 RepID=C2V4C9_BACCE
radical SAM domain protein
rifcsphigho2_01_scaffold_23974_12
unknown

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comp(9689..11965)
-----------------
DNA (2277bp)
protein (759aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23974_13
unknown

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comp(12072..12422)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23974_14

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12643..13002
-----------------
DNA (360bp)
protein (120aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4); K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4] id=5051024 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RNA 3'-phosphate cyclase
rifcsphigho2_01_scaffold_23974_15

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13205..13648
-----------------
DNA (444bp)
protein (148aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-phosphate cyclase id=4935160 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_23974_16
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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13896..14411
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein; K08999 hypothetical protein id=5049675 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_23974_17
unknown

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comp(14454..15080)
-----------------
DNA (627bp)
protein (209aa)

This feature has no annotations

rifcsphigho2_01_scaffold_23974_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15165..15653)
-----------------
DNA (489bp)
protein (163aa)
Displaying 18 items

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