ggKbase home page

rifcsphigho2_01_scaffold_1364

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_01_scaffold_1364_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1..369
-----------------
DNA (369bp)
protein (123aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVC5_THEON id=5103729 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_01_scaffold_1364_2
unknown

Not on your lists

353..1132
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1364_3
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(1095..1766)
-----------------
DNA (672bp)
protein (224aa)
Endonuclease III n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E1L2_GEOLS
HhH-GPD family protein
rifcsphigho2_01_scaffold_1364_4
unknown

Not on your lists

comp(1790..2437)
-----------------
DNA (648bp)
protein (216aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1364_5
Clostridium sp. CAG:302, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2521..2970)
-----------------
DNA (450bp)
protein (150aa)
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. CAG:302 RepID=R6M6P6_9CLOT
lipoprotein signal peptidase
rifcsphigho2_01_scaffold_1364_6

Not on your lists

comp(2970..3467)
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=nanoarchaeote Nst1 RepID=R1FU05_9ARCH id=5103045 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_01_scaffold_1364_7
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(3468..4001)
-----------------
DNA (534bp)
protein (178aa)
rifcsphigho2_01_scaffold_1364_8
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3988..4515)
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein
id=5103047 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_1364_9
unknown

Not on your lists

4621..6138
-----------------
DNA (1518bp)
protein (506aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621708
hypothetical protein
rifcsphigho2_01_scaffold_1364_10
unknown

Not on your lists

6183..6470
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1364_11
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

6513..7112
-----------------
DNA (600bp)
protein (200aa)
trichohyalin
rifcsphigho2_01_scaffold_1364_12

Not on your lists

7109..9049
-----------------
DNA (1941bp)
protein (647aa)
AP endonuclease family enzyme n=1 Tax=nanoarchaeote Nst1 RepID=R1G9P0_9ARCH id=5103721 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
AP endonuclease family enzyme
rifcsphigho2_01_scaffold_1364_13

Not on your lists

8994..9848
-----------------
DNA (855bp)
protein (285aa)
DNA polymerase beta domain protein region n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWJ4_9EURY id=5103718 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase beta protein
rifcsphigho2_01_scaffold_1364_14
unknown

Not on your lists

comp(9854..10519)
-----------------
DNA (666bp)
protein (222aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1364_15
unknown

Not on your lists

comp(10694..11206)
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1364_16
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(11203..13257)
-----------------
DNA (2055bp)
protein (685aa)
Phosphoenolpyruvate synthase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REF9_ARCPA
phosphoenolpyruvate synthase
rifcsphigho2_01_scaffold_1364_17
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

13324..13950
-----------------
DNA (627bp)
protein (209aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6W090_9EURY
rifcsphigho2_01_scaffold_1364_18
unknown

Not on your lists

comp(13947..14078)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1364_19
unknown

Not on your lists

comp(14140..15045)
-----------------
DNA (906bp)
protein (302aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1364_20
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(15184..15699)
-----------------
DNA (516bp)
protein (172aa)
ASCG--Ribosomal--protein--L10e
50S ribosomal protein L10e id=5800536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L10e
rifcsphigho2_01_scaffold_1364_21
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(15701..15961)
-----------------
DNA (261bp)
protein (87aa)
50S ribosomal protein L35Ae n=1 Tax=sediment metagenome RepID=D9PEX7_9ZZZZ id=5103617 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L35Ae
rifcsphigho2_01_scaffold_1364_22

Not on your lists

comp(16221..16493)
-----------------
DNA (273bp)
protein (91aa)
rifcsphigho2_01_scaffold_1364_23
unknown

Not on your lists

16613..16750
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1364_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16859..18673)
-----------------
DNA (1815bp)
protein (605aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1B22
Minimal nucleotidyltransferase fused to HEPN protein
rifcsphigho2_01_scaffold_1364_25
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

18761..19729
-----------------
DNA (969bp)
protein (323aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=5049182 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld
rifcsphigho2_01_scaffold_1364_26

Not on your lists

19677..20867
-----------------
DNA (1191bp)
protein (397aa)
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain id=5049183 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
batB; batB protein
rifcsphigho2_01_scaffold_1364_27

Not on your lists


comp(22099..22662)
-----------------
DNA (564bp)
protein (188aa)
ASCG--Ribosomal--protein--S7
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S7
rifcsphigho2_01_scaffold_1364_28
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(22683..23120)
-----------------
DNA (438bp)
protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5044114 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S12
rifcsphigho2_01_scaffold_1364_29
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(23122..23526)
-----------------
DNA (405bp)
protein (135aa)
Putative KH domain protein n=3 Tax=environmental samples RepID=B3T301_9ARCH id=5103769 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_01_scaffold_1364_30

Not on your lists

comp(23526..23774)
-----------------
DNA (249bp)
protein (83aa)
50S ribosomal protein L30e n=12 Tax=Sulfolobus RepID=RL30E_SULSO id=5103775 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30e
Displaying items 1-30 of 47 in total

View Taxonomy