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rifcsphigho2_01_scaffold_58364

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_58364_1

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2..490
DNA (489bp) protein (163aa)
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5051520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4
rifcsphigho2_01_scaffold_58364_2
unknown

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496..978
DNA (483bp) protein (161aa)

This feature has no annotations

rifcsphigho2_01_scaffold_58364_3

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999..1448
DNA (450bp) protein (150aa)
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
rifcsphigho2_01_scaffold_58364_4
AR9, Woesearchaeaota, DPANN, Archaea

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1500..2279
DNA (780bp) protein (260aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR9
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
rifcsphigho2_01_scaffold_58364_5
AR9, Woesearchaeaota, DPANN, Archaea

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2332..2640
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037805E2
50S ribosomal protein L18; K02883 large subunit ribosomal protein L18e Tax=AR9
50S ribosomal protein L18e
rifcsphigho2_01_scaffold_58364_6
AR9, Woesearchaeaota, DPANN, Archaea

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2697..3122
DNA (426bp) protein (142aa)
50S ribosomal protein L13 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGB3_PYRYC
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=AR9
50S ribosomal protein L13P
rifcsphigho2_01_scaffold_58364_7

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3119..3514
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003817}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S9
rifcsphigho2_01_scaffold_58364_8
CG_Woesearch_03, Woesearchaeota, Archaea

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3525..3722
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Woesearch_03
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5045700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit N
rifcsphigho2_01_scaffold_58364_9
unknown

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3842..4093
DNA (252bp) protein (84aa)

This feature has no annotations

rifcsphigho2_01_scaffold_58364_10
unknown

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comp(4086..4562)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CC783
rifcsphigho2_01_scaffold_58364_11
unknown

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4684..5463
DNA (780bp) protein (260aa)

This feature has no annotations

Displaying 11 items

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