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RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_1
R_WOR_1_53_15, WOR-1, Bacteria

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comp(1..5619)
DNA (5619bp) protein (1873aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Putative uncharacterized protein id=1783070 bin=GWD2_RBX1-related_39_127 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_2
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(5616..6476)
DNA (861bp) protein (287aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_3
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(6580..7053)
DNA (474bp) protein (158aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.1.-] id=68506 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_4
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(7348..7536)
DNA (189bp) protein (63aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Putative uncharacterized protein id=1743866 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_5
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(7654..8391)
DNA (738bp) protein (246aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_6
R_WOR_1_53_15, WOR-1, Bacteria

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8496..8687
DNA (192bp) protein (64aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_7
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

8684..9235
DNA (552bp) protein (184aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Putative uncharacterized protein id=3879900 bin=GWC2_Planctomycete_KSU_39_26 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_8
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

9237..10001
DNA (765bp) protein (255aa)
putative Baf family transcriptional acitvator; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Type III pantothenate kinase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PTM0_MEIRD
putative Baf family transcriptional acitvator
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_9
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

9994..11514
DNA (1521bp) protein (507aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=1891875 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_10
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

11501..12346
DNA (846bp) protein (282aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NP99_MARHT
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_11
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(12312..13697)
DNA (1386bp) protein (462aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Apolipoprotein N-acyltransferase id=4180748 bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
lnt; apolipoprotein N-acyltransferase
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_12
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(13676..14317)
DNA (642bp) protein (214aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_13
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(14319..16601)
DNA (2283bp) protein (761aa)
OstA family protein; K04744 LPS-assembly protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Putative organic solvent tolerance protein id=4379211 bin=GWF2_OP9_related_35_9 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
OstA family protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_14
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(16601..18940)
DNA (2340bp) protein (780aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
SLEI family protein id=3998878 bin=GWF2_OP9-related_38_17 species=Tetrahymena thermophila genus=Tetrahymena taxon_order=Hymenostomatida taxon_class=Oligohymenophorea phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_15
R_WOR_1_53_15, WOR-1, Bacteria

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comp(18940..20016)
DNA (1077bp) protein (359aa)
putative permease Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Permease YjgP/YjgQ family protein id=1803902 bin=GWD2_RBX1-related_39_127 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
putative permease
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_16
R_WOR_1_53_15, WOR-1, Bacteria

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comp(20017..20211)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Allofustis seminis RepID=UPI00036F3592
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
rpsU; 30S ribosomal protein S21
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_17
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(20236..20889)
DNA (654bp) protein (218aa)
PSP1 domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
PSP1 domain protein id=3998954 bin=GWF2_OP9-related_38_17 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
PSP1 domain-containing protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_18
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(20886..21608)
DNA (723bp) protein (241aa)
dnaX; DNA polymerase III gamma subunit; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
DNA polymerase III, delta prime subunit n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9X2_9BACI
dnaX; DNA polymerase III subunit gamma
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_19
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(21623..23569)
DNA (1947bp) protein (649aa)
SpoT; guanosine polyphosphate pyrophosphohydrolases/synthetases; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Guanosine polyphosphate pyrophosphohydrolases/synthetases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3D9_PELTS
SpoT; guanosine polyphosphate pyrophosphohydrolases/synthetases
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_20
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(23566..24216)
DNA (651bp) protein (217aa)
AraD; L-fuculose phosphate aldolase (EC:4.1.2.17); K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
AraD; L-fuculose phosphate aldolase (EC:4.1.2.17)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3S8_PELTS
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_21
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(24220..25137)
DNA (918bp) protein (306aa)
pfkB-3; ATP-dependent phosphofructokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
pfkB-3; ATP-dependent phosphofructokinase (EC:2.7.1.15)
Putative ATP-dependent phosphofructokinase (PFK-B family) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1B5_UNCMA
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_22
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(25195..25572)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QF33_9FIRM
transposase is200-family protein; K07491 putative transposase Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
transposase is200-family protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_23
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(25757..26005)
DNA (249bp) protein (83aa)
YGGT family protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
YGGT family protein id=2152023 bin=GWB2_CP_45_9 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_24
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(25993..26832)
DNA (840bp) protein (280aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Cyanothece sp. (strain PCC 8801) RepID=B7JW57_CYAP8
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_25
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(26822..28474)
DNA (1653bp) protein (551aa)
S-layer protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Tetratricopeptide TPR_1 repeat-containing protein id=2143561 bin=GWD2_RBX1-related_39_127 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
S-layer protein
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_26
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(28577..28708)
DNA (132bp) protein (44aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_27
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(28710..28943)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XCG0_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_28
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(29435..29716)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B6A20C
Uncharacterized protein family (UPF0150) Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Uncharacterized protein family (UPF0150)
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_29
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

comp(29847..30089)
DNA (243bp) protein (81aa)
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
RIFCSPHIGHO2_01_FULL_CP_53_15_rifcsphigho2_01_scaffold_2824_30
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

30305..30754
DNA (450bp) protein (150aa)
S23 ribosomal protein Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Putative uncharacterized protein id=4716599 bin=GWA2_OP3_53_43 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
S23 ribosomal protein
Displaying items 1-30 of 38 in total

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