ggKbase home page

RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2..1183
DNA (1182bp) protein (394aa)
Recombinase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVL3_HIPMA
recombinase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
recombinase
RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

1220..1768
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HAI1_SALRM
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(1853..3541)
DNA (1689bp) protein (563aa)
Type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Type IV pilus assembly protein PilM id=1797506 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(3990..4730)
DNA (741bp) protein (247aa)
tolA; cell envelope integrity inner membrane protein; K03646 colicin import membrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
TolA protein id=5095360 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
tolA; cell envelope integrity inner membrane protein
RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(4720..5055)
DNA (336bp) protein (112aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(5452..7275)
DNA (1824bp) protein (608aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=sediment metagenome RepID=D9PHK9_9ZZZZ
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ABC transporter ATP-binding protein
RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(7278..7481)
DNA (204bp) protein (68aa)
Regulatory protein C.BcnI n=1 Tax=Brevibacillus centrosporus RepID=Q8RNV9_9BACL
XRE family transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
XRE family transcriptional regulator
RIFCSPHIGHO2_01_FULL_CPR_44_130_rifcsphigho2_01_scaffold_31601_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(7908..8081)
DNA (174bp) protein (58aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein id=18248223 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Displaying 8 items

View Taxonomy