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RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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231..395
-----------------
DNA (165bp)
protein (55aa)
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6F8_FRAAD
response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein; K15012 two-component system, response regulator RegA Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_2
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(503..1174)
-----------------
DNA (672bp)
protein (224aa)
High frequency lysogenization protein HflD homolog n=1 Tax=Beggiatoa alba B18LD RepID=I3CJ29_9GAMM
hflD; High frequency lysogenization protein hflD-like protein; K07153 high frequency lysogenization protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hflD; High frequency lysogenization protein hflD-like protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1276..1536)
-----------------
DNA (261bp)
protein (87aa)
Protein mrp-like protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFI0_9BACT
PaaD-like protein involved in Fe-S cluster assembly (DUF59) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PaaD-like protein involved in Fe-S cluster assembly (DUF59)
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_4
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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1931..3085
-----------------
DNA (1155bp)
protein (385aa)
Patatin n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CM79_SIDLE
patatin; K07001 NTE family protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
patatin
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3082..3282
-----------------
DNA (201bp)
protein (67aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JEB3_NITOC
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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3827..4444
-----------------
DNA (618bp)
protein (206aa)
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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5371..5703
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9443 RepID=I4G0D0_MICAE
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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5696..5917
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1F3_NITHN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
conserved hypothetical protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_9
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6021..6470)
-----------------
DNA (450bp)
protein (150aa)
outer membrane lipoprotein; K06077 outer membrane lipoprotein SlyB Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
outer membrane lipoprotein; K06077 outer membrane lipoprotein SlyB id=12493023 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
outer membrane lipoprotein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6685..10260)
-----------------
DNA (3576bp)
protein (1192aa)
Pyridine nucleotide-disulfide oxidoreductase family n=3 Tax=Coxiella burnetii RepID=B6J186_COXB2
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
pyridine nucleotide-disulfide oxidoreductase
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_11
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10537..10734)
-----------------
DNA (198bp)
protein (66aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003807258
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10826..11344)
-----------------
DNA (519bp)
protein (173aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BW52_NITHN
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
molybdenum cofactor biosynthesis protein C
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_13
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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11528..11959
-----------------
DNA (432bp)
protein (144aa)
Transposition helper protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8E4_AROAE
istB; transposition helper protein
Transposition helper protein {ECO:0000313|EMBL:CAI06415.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromati
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12261..12803)
-----------------
DNA (543bp)
protein (181aa)
molybdopterin biosynthesis protein B n=1 Tax=Marinobacterium rhizophilum RepID=UPI00035DA666
molybdenum cofactor biosynthesis protein B; K03638 molybdenum cofactor biosynthesis protein B Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
molybdenum cofactor biosynthesis protein B
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_15
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12889..13215)
-----------------
DNA (327bp)
protein (109aa)
Response regulator n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DF43_9GAMM
Fis family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
putative response regulator
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_16
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13288..14703)
-----------------
DNA (1416bp)
protein (472aa)
protoporphyrinogen oxidase; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Protoporphyrinogen IX oxidase, aerobic id=4759992 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
protoporphyrinogen oxidase
RIFCSPHIGHO2_01_FULL_Gammaproteobacteria_61_200_rifcsphigho2_01_scaffold_14877_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(14700..15068)
-----------------
DNA (369bp)
protein (123aa)
Universal stress protein id=4759993 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
putative universal stress protein UspA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Displaying 17 items

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