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RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_1
RIFOXYC2_FULL_RIF_OD1_09_47_9_curated, RIF-OD1-9, Parcubacteria, Bacteria

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comp(249..1406)
-----------------
DNA (1158bp)
protein (386aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus laterosporus LMG 15441 RepID=F7TZL3_BRELA
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_2
Parcubacteria bacterium GW2011_GWB1_50_9, Parcubacteria, Bacteria

Not on your lists

comp(1425..2165)
-----------------
DNA (741bp)
protein (247aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus laterosporus LMG 15441 RepID=F7TZL4_BRELA
putative oxidoreductase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_3
Bacteriovorax sp. Seq25_V, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2348..3640
-----------------
DNA (1293bp)
protein (431aa)
BSCG--tRNA--synthetase--alanyl
Alanine--tRNA ligase n=1 Tax=Bacteriovorax sp. Seq25_V RepID=T0RAT2_9DELT
alaS; alanyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_4
GWC1_OD1_36_9, Parcubacteria, Bacteria

Not on your lists

3769..4620
-----------------
DNA (852bp)
protein (284aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000362D291
GTP-dependent nucleic acid-binding protein EngD
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_5
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

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4747..5634
-----------------
DNA (888bp)
protein (296aa)
SAM-dependent methyltransferase (EC:2.1.1.64)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA536-G10 RepID=UPI00036A1A4E
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_6
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

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5659..6684
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZCL0_9BACT
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_7
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


6751..9156
-----------------
DNA (2406bp)
protein (802aa)
BSCG--tRNA--synthetase--leucyl
leucyl-tRNA synthetase n=1 Tax=Bacillus coagulans RepID=UPI00037A34A3
leuS; leucyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_8
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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9213..12275
-----------------
DNA (3063bp)
protein (1021aa)
Putative membrane-anchored cell surface protein, haemagluttinin id=5227522 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_9
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12355..14433
-----------------
DNA (2079bp)
protein (693aa)
Tfp pilus assembly protein PilF id=5226970 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tetratricopeptide TPR_2 repeat-containing protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_10
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14517..16196
-----------------
DNA (1680bp)
protein (560aa)
mviN1; integral membrane protein MviN; K03980 virulence factor id=5226971 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative peptidoglycan lipid II flippase MurJ
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_11
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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16247..18004
-----------------
DNA (1758bp)
protein (586aa)
hypothetical protein id=5801897 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_12
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18043..19902
-----------------
DNA (1860bp)
protein (620aa)
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=5803537 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GTP-binding protein LepA
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_13
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20100..20474
-----------------
DNA (375bp)
protein (125aa)
transmembrane_regions id=5803575 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_14
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20890..21123
-----------------
DNA (234bp)
protein (78aa)
glutaredoxin-like protein, YruB-family id=5226974 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
glutaredoxin
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_15
R_OD1_Nomurabacteria_40_15, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

21200..21991
-----------------
DNA (792bp)
protein (264aa)
Diguanylate cyclase n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UU70_SULAO
diguanylate cyclase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_16
R_OD1_Nomurabacteria_42_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22049..22306
-----------------
DNA (258bp)
protein (86aa)
transmembrane_regions id=5226975 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_17
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22428..22913)
-----------------
DNA (486bp)
protein (162aa)
Protein containing Heat shock protein Hsp20 domain id=5226976 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Small heat shock protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_18
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22917..23600)
-----------------
DNA (684bp)
protein (228aa)
Putative uncharacterized protein id=5226977 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_19
R_OD1_Nomurabacteria_39_17, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(23590..25755)
-----------------
DNA (2166bp)
protein (722aa)
BSCG--tRNA--synthetase--Valyl
ASCG--Valyl-tRNA--synthetase
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVT0_9BACT
valyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_20
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists


comp(25788..26981)
-----------------
DNA (1194bp)
protein (398aa)
ASCG--tRNA--N6-adenosine--threonylcarbamoyltransferase
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYF3_9BACT
DNA-binding/iron metalloprotein/AP endonuclease
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_21
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(27072..27458)
-----------------
DNA (387bp)
protein (129aa)
Cupin domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBY0_9CAUL id=120084 bin=ACD76 species=Brevundimonas sp. BAL3 genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
mannose-6-phosphate isomerase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_22
unknown

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27839..28162
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_23
R_OD1_Nomurabacteria_41_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(28882..29205)
-----------------
DNA (324bp)
protein (108aa)
Ribosome-binding factor A id=5803474 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_24
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(29240..30790)
-----------------
DNA (1551bp)
protein (517aa)
id=5227220 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
bacterial translation initiation factor 2 (bIF-2)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_25
R_OD1_Nomurabacteria_38_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(30894..31370)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein id=5227219 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_26
R_OD1_Nomurabacteria_39_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

31395..32636
-----------------
DNA (1242bp)
protein (414aa)
id=5227218 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cysteine desulfurase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_27
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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32640..33416
-----------------
DNA (777bp)
protein (259aa)
Putative uncharacterized protein id=5803368 bin=OD1_GWC2_34_28 species=uncultured bacterium CSLC2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_28
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

33447..36173
-----------------
DNA (2727bp)
protein (909aa)
id=5227216 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ATP-dependent chaperone ClpB
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_29
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(36231..37946)
-----------------
DNA (1716bp)
protein (572aa)
resolvase domain-containing protein id=5094973 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
recombinase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_661_30
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(38090..40297)
-----------------
DNA (2208bp)
protein (736aa)
Uncharacterized protein id=5096806 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
hypothetical protein
Displaying items 1-30 of 61 in total

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