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RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_1
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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comp(98..520)
-----------------
DNA (423bp)
protein (141aa)
BSCG--ribosomal--protein--L11
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5227532 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplK; 50S ribosomal protein L11
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_2
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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comp(527..1072)
-----------------
DNA (546bp)
protein (182aa)
transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG id=5227531 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
NusG antitermination factor
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_3
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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comp(1410..1913)
-----------------
DNA (504bp)
protein (168aa)
membrane-flanked domain protein; K08981 putative membrane protein id=74772 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_4
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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comp(1993..4767)
-----------------
DNA (2775bp)
protein (925aa)
Putative glycosyl hydrolase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XY58_9FIRM
peptidoglycan-binding domain 1 protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_5
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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comp(4930..5739)
-----------------
DNA (810bp)
protein (270aa)
outer membrane protein; K09807 hypothetical protein id=5227529 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(5751..6215)
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXC8_9BACT
Peptidylprolyl isomerase FKBP-type
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(6319..6456)
-----------------
DNA (138bp)
protein (46aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(6487..7539)
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036672FF
UDP-N-acetylenolpyruvoylglucosamine reductase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7767..8318)
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EMB4_9BACT
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(8338..8826)
-----------------
DNA (489bp)
protein (163aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XMC6_9BACT id=54159 bin=ACD41 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_11
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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8865..9089
-----------------
DNA (225bp)
protein (75aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_12
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(9072..11741)
-----------------
DNA (2670bp)
protein (890aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003825E53
calcium-translocating P-type ATPase, PMCA-type
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_13
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(11744..12223)
-----------------
DNA (480bp)
protein (160aa)
DSBA oxidoreductase id=3544170 bin=GWA1_ZB2_49_26 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_14

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12248..12517
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00035D693B
ada; methylated DNA-protein cysteine methyltransferase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_15
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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13210..14184
-----------------
DNA (975bp)
protein (325aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF83_9BACT
transposase IS116/IS110/IS902 family protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_16
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(14317..15099)
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein id=7202297 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_17

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comp(15117..15323)
-----------------
DNA (207bp)
protein (69aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037C0E75
DNA-binding protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_18
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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15387..15743
-----------------
DNA (357bp)
protein (119aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_19
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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15805..16179
-----------------
DNA (375bp)
protein (125aa)
Transposase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVJ0_CLOBO id=96731 bin=ACD63 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
transposase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_20
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(16962..17513)
-----------------
DNA (552bp)
protein (184aa)
BSCG--ribosomal--protein--L19
50S ribosomal protein L19 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYD6_9BACT
50S ribosomal protein L19
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_21
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17533..18573)
-----------------
DNA (1041bp)
protein (347aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CXZ9_9BACT
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_12161_22
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18578..19261)
-----------------
DNA (684bp)
protein (228aa)
Pseudouridine synthase, RluA family id=5227486 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RluA family pseudouridine synthase
Displaying 22 items

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