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RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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1..273
-----------------
DNA (273bp)
protein (91aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_2
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

343..810
-----------------
DNA (468bp)
protein (156aa)
Glycerol-3-phosphate cytidylyltransferase id=2598231 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cytidyltransferase-related enzyme
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_3
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

811..1608
-----------------
DNA (798bp)
protein (266aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Rhodopirellula baltica WH47 RepID=F2B115_RHOBT
HAD family hydrolase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_4
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

1659..2009
-----------------
DNA (351bp)
protein (117aa)
Mannose-6-phosphate isomerase, type II id=5227492 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
mannose-6-phosphate isomerase, type II
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_5
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

1984..3123
-----------------
DNA (1140bp)
protein (380aa)
glycosidase ph1107-related protein id=5803228 bin=OD1_GWC2_34_28 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glycosidase ph1107-related protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_6
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

3132..3722
-----------------
DNA (591bp)
protein (197aa)
DNA-damage-inducible protein D id=2069938 bin=GWD2_Desulfuromonadales_54_10 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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3729..5696
-----------------
DNA (1968bp)
protein (656aa)
Glycosidase ph1107-related protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZS7_9BACT
glycosidase ph1107-related protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_8

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5708..6013
-----------------
DNA (306bp)
protein (102aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6015..6410
-----------------
DNA (396bp)
protein (132aa)
Ribosomal protein S30Ae/sigma 54 modulation protein id=5227162 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_10
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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comp(6440..7282)
-----------------
DNA (843bp)
protein (281aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW56_9BACT
methionyl-tRNA formyltransferase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_11
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(7288..7872)
-----------------
DNA (585bp)
protein (195aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] id=5227160 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
def; peptide deformylase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_12

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comp(7880..9178)
-----------------
DNA (1299bp)
protein (433aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYX5_9BACT
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_13
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(9212..9817)
-----------------
DNA (606bp)
protein (202aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=5803493 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
signal peptidase I (EC:3.4.21.89)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_14
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

9919..10446
-----------------
DNA (528bp)
protein (176aa)
Peptidyl-tRNA hydrolase id=5227157 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Peptidyl-tRNA hydrolase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_15
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(10626..10802)
-----------------
DNA (177bp)
protein (59aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_16
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(10830..14096)
-----------------
DNA (3267bp)
protein (1089aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXJ6_9BACT
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_17
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

14244..14426
-----------------
DNA (183bp)
protein (61aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_18
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

14584..14856
-----------------
DNA (273bp)
protein (91aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_19
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

14860..15111
-----------------
DNA (252bp)
protein (84aa)
addiction module antitoxin id=4260 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_20
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

15135..16232
-----------------
DNA (1098bp)
protein (366aa)
id=5227056 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Glyceraldehyde-3-phosphate dehydrogenase, type I
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_21
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16237..16614
-----------------
DNA (378bp)
protein (126aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_22
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16698..16901
-----------------
DNA (204bp)
protein (68aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_23
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

16910..17218
-----------------
DNA (309bp)
protein (103aa)
putative bacteriophage protein n=2 Tax=Burkholderia RepID=UPI00016AFA5C id=73034 bin=ACD51 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
phage-like
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_24
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

17263..17565
-----------------
DNA (303bp)
protein (101aa)
Transcriptional regulator, XRE family n=1 Tax=uncultured bacterium RepID=K2DDQ2_9BACT
helix-turn-helix domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_25
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

17590..18069
-----------------
DNA (480bp)
protein (160aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=5803339 bin=OD1_GWC2_34_28 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribose-5-phosphate isomerase B
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_26
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18069..18881
-----------------
DNA (813bp)
protein (271aa)
suhB; inositol-1-monophosphatase (EC:3.1.3.25)
myo-inositol-1(or 4)-monophosphatase n=1 Tax=Paenibacillus sp. ICGEB2008 RepID=UPI00036F9550
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_27
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18874..19581
-----------------
DNA (708bp)
protein (236aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase id=5227054 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_28

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19589..20452
-----------------
DNA (864bp)
protein (288aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) id=15189839 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Transketolase protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_29
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

20463..20984
-----------------
DNA (522bp)
protein (174aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SFK4_PELPB
dinD; DNA-damage-inducible protein D
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_974_30
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20998..22005
-----------------
DNA (1008bp)
protein (336aa)
Transketolase, central region n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX64_9BACT
Transketolase, central region
Displaying items 1-30 of 56 in total

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