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RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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46..729
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein
id=3486291 bin=GWA1_ZB2_49_26 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_2
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

729..1493
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZGA7_9BACT
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_3
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

1516..2502
-----------------
DNA (987bp)
protein (329aa)
Alr1779 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YW37_NOSS1
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_4
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(2567..3103)
-----------------
DNA (537bp)
protein (179aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KML0_SOLCM
deoxycytidine triphosphate deaminase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_5
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(3126..3665)
-----------------
DNA (540bp)
protein (180aa)
Dihydrofolate reductase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3Q8_SPHS2
dihydrofolate reductase subunit
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3676..4548)
-----------------
DNA (873bp)
protein (291aa)
id=5227253 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
thyB; thymidylate synthase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_7
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(4633..5679)
-----------------
DNA (1047bp)
protein (349aa)
Phospholipase D/Transphosphatidylase id=3013078 bin=GWC1_OD1_38_17 species=unknown genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cls; cardiolipin synthetase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5873..6556)
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI00031BA429
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6777..6992
-----------------
DNA (216bp)
protein (72aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_10
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

6979..7809
-----------------
DNA (831bp)
protein (277aa)
ATP synthase subunit a n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVT7_9BACT
ATP synthase F0 subunit A
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_11
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

7924..8160
-----------------
DNA (237bp)
protein (79aa)
Putative F0F1-type ATPase subunit C id=2169616 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
putative F0F1-type ATPase subunit C
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_12
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8203..8652
-----------------
DNA (450bp)
protein (150aa)
ATP synthase F0 subunit B n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYK3_9BACT
ATP synthase subunit b
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_13
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

8657..9076
-----------------
DNA (420bp)
protein (140aa)
atpH; ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] id=5227033 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_14
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9086..10585
-----------------
DNA (1500bp)
protein (500aa)
atpA; ATP synthase F1 subunit alpha (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX46_9BACT
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_15
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

10592..11437
-----------------
DNA (846bp)
protein (282aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YL65_9BACT
phage antirepressor protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_16
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

11472..11699
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVN3_KYRT2
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_17
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

11949..12875
-----------------
DNA (927bp)
protein (309aa)
atpG; ATP synthase F0F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] id=5227031 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ATP synthase F1 subunit gamma (EC:3.6.3.14)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_18

Not on your lists

12983..14350
-----------------
DNA (1368bp)
protein (456aa)
ATP synthase F0F1 subunit beta n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZW0_9BACT
ATP synthase F1 subunit beta
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_19
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14354..14797
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYJ7_9BACT
ATP synthase F1 subunit epsilon
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_20
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14870..15091
-----------------
DNA (222bp)
protein (74aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_21
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15097..15357
-----------------
DNA (261bp)
protein (87aa)
Plasmid stabilization system id=4731806 bin=GWC2_OD1_43_27 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_22
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15363..16067
-----------------
DNA (705bp)
protein (235aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=5803064 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_23
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16110..16310)
-----------------
DNA (201bp)
protein (67aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_24
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(16367..16690)
-----------------
DNA (324bp)
protein (108aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_25
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

16809..17822
-----------------
DNA (1014bp)
protein (338aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYT3_9BACT
MreB/Mrl family cell shape determining protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_26
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

17876..18604
-----------------
DNA (729bp)
protein (243aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=5803600 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_27
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

18617..19168
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXD1_9BACT
ribosome recycling factor
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_28
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19186..20256
-----------------
DNA (1071bp)
protein (357aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW15_9BACT
membrane-associated zinc metalloprotease
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_29
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

20308..22017
-----------------
DNA (1710bp)
protein (570aa)
seg id=5227013 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_2959_30
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

22021..22761
-----------------
DNA (741bp)
protein (247aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=5091452 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
peptidase M24
Displaying items 1-30 of 34 in total

View Taxonomy