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RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..120)
-----------------
DNA (120bp)
protein (40aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_2
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists


570..2036
-----------------
DNA (1467bp)
protein (489aa)
BSCG--tRNA--synthetase--aspartyl
Aspartyl-tRNA synthetase id=3544693 bin=GWC1_OD1_38_17 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
aspartyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_3
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2045..2374
-----------------
DNA (330bp)
protein (110aa)
Riboflavin biosynthesis protein RibF n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC6_9BACT
riboflavin biosynthesis protein RibF
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_4
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

2368..3354
-----------------
DNA (987bp)
protein (329aa)
DMT superfamily drug/metabolite permease id=2866773 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_5
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

3386..3727
-----------------
DNA (342bp)
protein (114aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=14631192 bin=bin9_gal15 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
transcriptional coactivator/pterin dehydratase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_6
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

3774..5273
-----------------
DNA (1500bp)
protein (500aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037F6610
DNA mismatch repair enzyme (predicted ATPase)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_7
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(6022..6414)
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVR0_9BACT
TrpR like protein, YerC/YecD
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_8
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(6816..9446)
-----------------
DNA (2631bp)
protein (877aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXJ2_9BACT
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_9
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

9469..10206
-----------------
DNA (738bp)
protein (246aa)
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A id=5803558 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Segregation and condensation protein A
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_10
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

10203..10748
-----------------
DNA (546bp)
protein (182aa)
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B id=5803557 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
chromosome segregation and condensation protein ScpB
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_11
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

10871..12013
-----------------
DNA (1143bp)
protein (381aa)
hypothetical protein id=5095372 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_12
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

12072..12569
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW52_9BACT
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_13
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(12630..13472)
-----------------
DNA (843bp)
protein (281aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPG0_HALH1
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_14
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

13610..14665
-----------------
DNA (1056bp)
protein (352aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYN2_9BACT
phospho-N-acetylmuramoyl-pentapeptide-transferase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_15
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14681..15787
-----------------
DNA (1107bp)
protein (369aa)
Stage V sporulation protein E (Required for spore cortex synthesis) id=5227063 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
stage V sporulation protein E
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_16

Not on your lists

15906..17048
-----------------
DNA (1143bp)
protein (381aa)
murG2; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=5227062 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
iron compound ABC transporter ATP-binding protein (EC:3.6.3.34)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_17
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17072..18505
-----------------
DNA (1434bp)
protein (478aa)
Glutamate-tRNA ligase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVV9_9BACT
Glutamate-tRNA ligase
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_18
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18468..19808
-----------------
DNA (1341bp)
protein (447aa)
peptidase, M23/M37 family id=5227060 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
peptidase M23
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_19
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

19837..20073
-----------------
DNA (237bp)
protein (79aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_20
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(20172..20573)
-----------------
DNA (402bp)
protein (134aa)
transmembrane_regions id=5227015 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_21

Not on your lists


20641..20913
-----------------
DNA (273bp)
protein (91aa)
BSCG--ribosomal--protein--L27
50S ribosomal protein L27 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYI4_9BACT
rpmA; 50S ribosomal protein L27
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_22
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(21003..21278)
-----------------
DNA (276bp)
protein (92aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_23
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(21362..21805)
-----------------
DNA (444bp)
protein (148aa)
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=5803507 bin=OD1_GWC2_34_28 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplI; 50S ribosomal protein L9
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_24
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(21815..23032)
-----------------
DNA (1218bp)
protein (406aa)
ctpA; carboxy-terminal-processing protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=5803506 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_25
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(23075..23296)
-----------------
DNA (222bp)
protein (74aa)
transmembrane_regions id=5227009 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_26
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(23357..24055)
-----------------
DNA (699bp)
protein (233aa)
Spore cortex-lytic enzyme SleB n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIH6_ALKOO
SpoIID/LytB domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_27
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

24111..24248
-----------------
DNA (138bp)
protein (46aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_28
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(24181..24333)
-----------------
DNA (153bp)
protein (51aa)
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_29
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(24374..24649)
-----------------
DNA (276bp)
protein (92aa)
cytotoxic translational repressor of toxin-antitoxin stability system id=5098639 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
toxin, RelE family
RIFCSPHIGHO2_01_FULL_OD1_39_220_rifcsphigho2_01_scaffold_611_30
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(24658..24825)
-----------------
DNA (168bp)
protein (56aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037FB1C6
Displaying items 1-30 of 67 in total

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