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RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_1
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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2..1771
-----------------
DNA (1770bp)
protein (590aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
transmembrane_regions id=5227392 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_2
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1781..2350
-----------------
DNA (570bp)
protein (190aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_3
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2359..3198
-----------------
DNA (840bp)
protein (280aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_4
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3203..3637
-----------------
DNA (435bp)
protein (145aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
transmembrane_regions id=5227394 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_5
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3646..4284
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS24062.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
hypothetical protein cdiviTM7_00582 id=5227395 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_6
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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4289..6139
-----------------
DNA (1851bp)
protein (617aa)
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5227396 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Type IV secretory pathway VirB4 components-like protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_7
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6230..7216
-----------------
DNA (987bp)
protein (329aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY71_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS04573.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_8
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7218..8207
-----------------
DNA (990bp)
protein (330aa)
transmembrane_regions 157..174 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
transmembrane_regions 157..174 id=120101 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_9
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8213..9529
-----------------
DNA (1317bp)
protein (439aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS24058.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
transmembrane_regions id=5227399 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_10
GWB1_OD1_36_5, Parcubacteria, Bacteria

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comp(9554..10036)
-----------------
DNA (483bp)
protein (161aa)
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:KKQ06329.1}; TaxID=1618862 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_36_5.;"
R3H domain protein id=5227400 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_11
GWB1_OD1_36_5, Parcubacteria, Bacteria

Not on your lists

comp(10029..10745)
-----------------
DNA (717bp)
protein (239aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWW8_9BACT
Preprotein translocase subunit YidC {ECO:0000313|EMBL:KKQ06330.1}; TaxID=1618862 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_36_5.;"
preprotein translocase subunit YidC
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_12
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(10816..11031)
-----------------
DNA (216bp)
protein (72aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Clostridium sp. CAG:389 RepID=R7LQA2_9CLOT
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_13
GWB1_OD1_36_5, Parcubacteria, Bacteria

Not on your lists

comp(10997..11320)
-----------------
DNA (324bp)
protein (108aa)
Ribonuclease P protein component Tax=GWB1_OD1_36_5
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_14
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11634..12974
-----------------
DNA (1341bp)
protein (447aa)
Chromosomal replication initiation protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0Y0_9BACT
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KKS04580.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
Chromosomal replication initiator protein DnaA
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_15
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13202..14299
-----------------
DNA (1098bp)
protein (366aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWX1_9BACT
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_16
GWB1_OD1_36_5, Parcubacteria, Bacteria

Not on your lists

14301..14558
-----------------
DNA (258bp)
protein (86aa)
Tax=GWB1_OD1_36_5
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_17
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14562..17075)
-----------------
DNA (2514bp)
protein (838aa)
1A family penicillin-binding protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5227408 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
1A family penicillin-binding protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_18
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17114..18325
-----------------
DNA (1212bp)
protein (404aa)
bcl:ABC2758 tyrZ; tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=71770 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tyrosyl-tRNA synthetase {ECO:0000313|EMBL:KKS04584.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_19
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18354..18476)
-----------------
DNA (123bp)
protein (41aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_20
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18573..19061)
-----------------
DNA (489bp)
protein (163aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=5227411 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ruvC; Crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease ruvC Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_21
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19490..20548)
-----------------
DNA (1059bp)
protein (353aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000313|EMBL:KKS04587.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
id=5227412 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Holliday junction DNA helicase, RuvB subunit
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_22
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20853..22550)
-----------------
DNA (1698bp)
protein (566aa)
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5227413 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_23
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22624..23082
-----------------
DNA (459bp)
protein (153aa)
ATPase, YjeE family {ECO:0000313|EMBL:KKS23455.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
Putative uncharacterized protein id=2966082 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
putative protein family UPF0079, ATPase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_24
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

23127..25508
-----------------
DNA (2382bp)
protein (794aa)
Polymerase protein {ECO:0000313|EMBL:KKS23456.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
id=5227418 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
DNA polymerase I
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_25
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

25532..26002
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS23457.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
Putative uncharacterized protein id=5227419 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_26
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

26017..26682
-----------------
DNA (666bp)
protein (222aa)
id=5803220 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5803220 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_27
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

27183..28730
-----------------
DNA (1548bp)
protein (516aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW52_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_28
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

28732..29238
-----------------
DNA (507bp)
protein (169aa)
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:KKS04594.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
tRNA/rRNA methyltransferase (SpoU) id=5227445 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
tRNA/rRNA methyltransferase SpoU
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_29
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(29329..30273)
-----------------
DNA (945bp)
protein (315aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase id=5227447 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_2297_30
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

30288..31124
-----------------
DNA (837bp)
protein (279aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Displaying items 1-30 of 32 in total

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