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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_1
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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3..479
-----------------
DNA (477bp)
protein (159aa)
Peptidoglycan binding protein n=1 Tax=uncultured bacterium RepID=K1YEJ1_9BACT
peptidoglycan-binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
peptidoglycan-binding domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_2
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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503..1489
-----------------
DNA (987bp)
protein (329aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5803344 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sugar kinase, ribokinase family
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_3
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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1491..2354
-----------------
DNA (864bp)
protein (288aa)
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Tagatose-bisphosphate aldolase id=4790072 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tagatose-bisphosphate aldolase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_4
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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2395..3366
-----------------
DNA (972bp)
protein (324aa)
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=3506657 bin=GWC1_OD1_38_17 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
D-isomer specific 2-hydroxyacid dehydrogenase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_5
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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3374..4291
-----------------
DNA (918bp)
protein (306aa)
capsule synthesis protein, CapA; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Capsule synthesis protein, CapA id=2720310 bin=GWA1_ZB2_49_26 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
capsule synthesis protein, CapA
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_6
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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4320..4994
-----------------
DNA (675bp)
protein (225aa)
ctc; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
50S ribosomal protein L25 id=3506654 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ctc; 50S ribosomal protein L25
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_7
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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5017..6318
-----------------
DNA (1302bp)
protein (434aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035E26E1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_8
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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6315..6833
-----------------
DNA (519bp)
protein (173aa)
gpmB; phosphoglycerate mutase (EC:5.4.2.1)
Phosphoglycerate mutase n=2 Tax=Corynebacterium ulcerans RepID=G0CWK6_CORUB
gpmB; phosphoglycerate mutase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_9
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(6830..7543)
-----------------
DNA (714bp)
protein (238aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Peptide chain release factor 1 id=2130234 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
peptide chain release factor 1
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_10
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(7521..7730)
-----------------
DNA (210bp)
protein (70aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003649896
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
50S ribosomal protein L31
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_11
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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7819..8565
-----------------
DNA (747bp)
protein (249aa)
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 id=5803360 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsB; 30S ribosomal protein S2
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_12
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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8558..9010
-----------------
DNA (453bp)
protein (151aa)
Elongation factor Ts n=1 Tax=uncultured bacterium RepID=K2AS02_9BACT
Translation elongation factor EFTs/EF1B dimerization; K02357 elongation factor Ts Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Translation elongation factor EFTs/EF1B dimerization
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_13
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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9015..9404
-----------------
DNA (390bp)
protein (130aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_21286_14
unknown

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9376..9483
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

Displaying 14 items

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