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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_1
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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1..93
-----------------
DNA (93bp)
protein (31aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_2
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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549..1571
-----------------
DNA (1023bp)
protein (341aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Winged helix-turn-helix transcription repressor DNA-binding id=5803536 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_3
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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1595..2902
-----------------
DNA (1308bp)
protein (436aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000370BA21
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_4
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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2904..3467
-----------------
DNA (564bp)
protein (188aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Putative uncharacterized protein id=1968393 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_5
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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3477..4970
-----------------
DNA (1494bp)
protein (498aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Putative uncharacterized protein id=5226944 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_6
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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5014..5649
-----------------
DNA (636bp)
protein (212aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Transposase id=5226892 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_7
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(5755..6156)
-----------------
DNA (402bp)
protein (134aa)
id=3978976 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
id=3978976 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_8
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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6441..8234
-----------------
DNA (1794bp)
protein (598aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVW3_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_9
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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8265..8570
-----------------
DNA (306bp)
protein (102aa)
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Putative uncharacterized protein (Fragment) id=5226945 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
CutA1 divalent ion tolerance protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_10
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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8605..10476
-----------------
DNA (1872bp)
protein (624aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
id=5226946 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_11
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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10454..10885
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LX32_9CLOT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_12
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(10910..12022)
-----------------
DNA (1113bp)
protein (371aa)
exopolysaccharide biosynthesis glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Second mannosyl transferase id=4077936 bin=GWB1_KAZAN_52_7 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWB1_KAZAN_52_7 organism_group=Kazan
exopolysaccharide biosynthesis glycosyltransferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_13
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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12050..13108
-----------------
DNA (1059bp)
protein (353aa)
glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Glycosyltransferase id=1956024 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_14
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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13105..14103
-----------------
DNA (999bp)
protein (333aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Glycosyl transferase group 1 id=2110511 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_15
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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14093..15850
-----------------
DNA (1758bp)
protein (586aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
coiled-coil id=5098651 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_16
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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15852..17588
-----------------
DNA (1737bp)
protein (579aa)
seg Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
seg id=5095700 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_17
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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17585..19324
-----------------
DNA (1740bp)
protein (580aa)
id=5093091 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
id=5093091 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_18
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

19326..20345
-----------------
DNA (1020bp)
protein (340aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036A4C11
RfaG8; glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RfaG8; glycosyltransferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_19
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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20333..21385
-----------------
DNA (1053bp)
protein (351aa)
glycosyltransferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
glycosyl transferase group 1 id=73491 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
glycosyltransferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_20
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

21382..22983
-----------------
DNA (1602bp)
protein (534aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_21
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

22983..23726
-----------------
DNA (744bp)
protein (248aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=V5RTX2_9BACT
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_22
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

23723..24772
-----------------
DNA (1050bp)
protein (350aa)
Glycosyl transferase group 1 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAA8_METIK
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_23
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

24765..25337
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Methyltransferase domain protein id=5016394 bin=GWA2_OP3_52_12 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_24
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

25304..25765
-----------------
DNA (462bp)
protein (154aa)
cytidyltransferase-related enzyme Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Glycerol-3-phosphate cytidylyltransferase id=2598231 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cytidyltransferase-related enzyme
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_25
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

25762..26814
-----------------
DNA (1053bp)
protein (351aa)
Group 1 glycosyl transferase n=1 Tax=uncultured bacterium RepID=K2CLE7_9BACT
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_26
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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26819..27820
-----------------
DNA (1002bp)
protein (334aa)
nucleoside-diphosphate-sugar epimerase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
NDP-sugar dehydratase or epimerase id=5016390 bin=GWA2_OP3_52_12 species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
nucleoside-diphosphate-sugar epimerase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_27
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

27827..29149
-----------------
DNA (1323bp)
protein (441aa)
nucleotide sugar dehydrogenase; K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037FB5A7
nucleotide sugar dehydrogenase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_28
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

29230..30213
-----------------
DNA (984bp)
protein (328aa)
rfaE_2; RfaE bifunctional protein, domain I (EC:2.7.1.-) Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rfaE_2; RfaE bifunctional protein, domain I (EC:2.7.1.-)
RfaE bifunctional protein id=5800140 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9616_29
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

30210..30788
-----------------
DNA (579bp)
protein (193aa)
glycosyl transferase, family 9 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Glycosyl transferase, family 9 id=1878045 bin=GWE2_CPR3_35_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
glycosyl transferase
Displaying 29 items

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