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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_1
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(488..1201)
-----------------
DNA (714bp)
protein (238aa)
trmD; tRNA (guanine-n(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
tRNA (guanine-N(1)-)-methyltransferase id=2185696 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
trmD; transfer RNA (guanine-N(1)-)-methyltransferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_2
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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1250..1546
-----------------
DNA (297bp)
protein (99aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_3
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(1585..1905)
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein; K06960 id=5803365 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_4
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(1959..2273)
-----------------
DNA (315bp)
protein (105aa)
rpsP; 30S ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=5803385 bin=OD1_GWC2_34_28 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsP; 30S ribosomal protein S16
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_5
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(2474..2566)
-----------------
DNA (93bp)
protein (31aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_6
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(2580..4775)
-----------------
DNA (2196bp)
protein (732aa)
chromosome segregation protein smc2; K03529 chromosome segregation protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Smc; chromosome segregation ATPase; K03529 chromosome segregation protein id=5803429 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
chromosome segregation protein smc2
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_7
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(4779..5471)
-----------------
DNA (693bp)
protein (231aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Ribonuclease 3 n=1 Tax=uncultured bacterium RepID=K2F7X1_9BACT
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_8
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(5476..6375)
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYA3_9BACT
putative transcription termination factor Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
putative transcription termination factor
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_9
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(6428..6670)
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F3F5F
50S ribosomal protein L32 ; K02911 large subunit ribosomal protein L32 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rpmF; 50S ribosomal protein L32
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_10
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(6702..7379)
-----------------
DNA (678bp)
protein (226aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361D698
hypothetical protein; K07491 putative transposase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_11
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(7432..7995)
-----------------
DNA (564bp)
protein (188aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] id=5803442 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribonuclease h (EC:3.1.26.4)
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_12
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

8018..11260
-----------------
DNA (3243bp)
protein (1081aa)
DNA polymerase III catalytic subunit, DnaE type; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000370808A
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_13
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

11220..12446
-----------------
DNA (1227bp)
protein (409aa)
Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037B17FF
Threonine-tRNA ligase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_14
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

12436..13263
-----------------
DNA (828bp)
protein (276aa)
tRNA dimethylallyltransferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=3544411 bin=GWA1_ZB2_49_26 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_9369_15
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(13253..14749)
-----------------
DNA (1497bp)
protein (499aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curat
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D9163
glutamyl-tRNA(Gln) amidotransferase subunit B
Displaying 15 items

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