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RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_1
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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469..1038
-----------------
DNA (570bp)
protein (190aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003615D0F
phaN; repressor; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
phaN; repressor
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_2
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(1077..3539)
-----------------
DNA (2463bp)
protein (821aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037A5934
Preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_3
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(3864..4304)
-----------------
DNA (441bp)
protein (147aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_4
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(4273..4512)
-----------------
DNA (240bp)
protein (80aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_5
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(4525..5181)
-----------------
DNA (657bp)
protein (219aa)
glycosyltransferase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase id=14429070 bin=bin3_NC10 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=bin3_NC10 organism_group=NC10
glycosyltransferase domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_6
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(5224..7416)
-----------------
DNA (2193bp)
protein (731aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_7
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(7441..8850)
-----------------
DNA (1410bp)
protein (470aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000373C57F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_8
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8837..9955)
-----------------
DNA (1119bp)
protein (373aa)
N-acetylneuraminate synthase (EC:2.5.1.56); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
N-acetylneuraminate synthase (EC:2.5.1.56)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003795D6E
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_9
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(10013..10924)
-----------------
DNA (912bp)
protein (304aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXU3_9BACT
protein of unknown function DUF6 transmembrane Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
protein of unknown function DUF6 transmembrane
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_10
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(10927..11643)
-----------------
DNA (717bp)
protein (239aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003628D67
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_11
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(11652..13205)
-----------------
DNA (1554bp)
protein (518aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00037B1644
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_12
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(13202..14152)
-----------------
DNA (951bp)
protein (317aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI0003640C84
lactate dehydrogenase-like oxidoreductase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
lactate dehydrogenase-like oxidoreductase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_13
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(14149..15198)
-----------------
DNA (1050bp)
protein (350aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA015-N04 RepID=UPI00037FBD95
dehydrogenase-like protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
dehydrogenase-like protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_14
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(15195..15908)
-----------------
DNA (714bp)
protein (238aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003628D67
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_15
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(16003..16980)
-----------------
DNA (978bp)
protein (326aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_16
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(17100..18272)
-----------------
DNA (1173bp)
protein (391aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14) Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase id=2881433 bin=GWF2_OP3_43_52 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_17
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(18259..19632)
-----------------
DNA (1374bp)
protein (458aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000373C57F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_18
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

19660..20301
-----------------
DNA (642bp)
protein (214aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036C10F1
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
type 11 methyltransferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_19
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(20282..21133)
-----------------
DNA (852bp)
protein (284aa)
glycosyl transferase family 2 n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B68320
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
family 2 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_20
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(21166..22323)
-----------------
DNA (1158bp)
protein (386aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_21
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(22320..23477)
-----------------
DNA (1158bp)
protein (386aa)
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1) Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1)
Aminotransferase, class I and II id=2253544 bin=GWB2_Proteobacteria_55_19 species=Candidatus Puniceispirillum marinum genus=Candidatus Puniceispirillum taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_22
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(23480..25153)
-----------------
DNA (1674bp)
protein (558aa)
thiamine pyrophosphate-requiring enzyme; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CW10_9BACT
thiamine pyrophosphate-requiring enzyme
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_23
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(25117..25626)
-----------------
DNA (510bp)
protein (170aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Histidinol-phosphate phosphatase family protein id=4230331 bin=GWF2_OP3_38_59 species=Desulfovibrio piezophilus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
histidinol-phosphate phosphatase family protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_24
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(25711..26370)
-----------------
DNA (660bp)
protein (220aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_25
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

26494..27507
-----------------
DNA (1014bp)
protein (338aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-M08 RepID=UPI00037C335C
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
oxidoreductase, NAD-binding domain protein
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_26
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

27531..27956
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=Bacteria RepID=UPI000368CC9A
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_27
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(27938..28675)
-----------------
DNA (738bp)
protein (246aa)
nucleotidyl transferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Nucleotidyl transferase id=1812743 bin=GWA2_OP3_53_43 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
nucleotidyl transferase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_28
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(28656..29660)
-----------------
DNA (1005bp)
protein (335aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
mpi:Mpet_1390 GHMP kinase; K07031 id=45809 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
GHMP kinase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_29
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(29660..30607)
-----------------
DNA (948bp)
protein (316aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1REX7_METP4
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
NAD-dependent epimerase/dehydratase
RIFCSPHIGHO2_01_FULL_OD1_43_100_rifcsphigho2_01_scaffold_1968_30
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

30656..31357
-----------------
DNA (702bp)
protein (234aa)
NUDIX hydrolase n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q10XU0_TRIEI
NUDIX hydrolase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
NUDIX hydrolase
Displaying items 1-30 of 34 in total

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