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RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(92..670)
DNA (579bp) protein (193aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
DEAD/DEAH box helicase domain protein id=4893135 bin=GWA2_Ignavibacteria-rel_35_8 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(824..2140)
DNA (1317bp) protein (439aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5803652 bin=OD1_GWC2_34_28 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
histidyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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2170..2964
DNA (795bp) protein (265aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=5803651 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3272..3574
DNA (303bp) protein (101aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
putative RNA-binding protein RbpA id=133499 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RNP-1 like RNA-binding protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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3676..4239
DNA (564bp) protein (188aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Putative uncharacterized protein id=1733959 bin=GWD2_CPR2_39_7 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4401..6182)
DNA (1782bp) protein (594aa)
GTP-binding protein TypA/BipA Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
GTP-binding protein typa; K06207 GTP-binding protein id=5803640 bin=OD1_GWC2_34_28 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GTP-binding protein TypA/BipA
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6320..6430)
DNA (111bp) protein (37aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6533..8497)
DNA (1965bp) protein (655aa)
dipeptidyl aminopeptidase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
peptidase S9 prolyl oligopeptidase active site domain-containing protein id=15190365 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
dipeptidyl aminopeptidase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8734..9948
DNA (1215bp) protein (405aa)
pilB; type 4 fimbrial assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
pilB; type 4 fimbrial assembly protein PilB; K02652 type IV pilus assembly protein PilB id=15190110 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
pilB; type 4 fimbrial assembly protein PilB
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9941..11017
DNA (1077bp) protein (359aa)
type II secretion system F domain protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
type II secretion system F domain protein; K02653 type IV pilus assembly protein PilC id=133531 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
type II secretion system F domain protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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10986..11501
DNA (516bp) protein (172aa)
seg 12..29 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
seg 12..29 id=30895 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_13299_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

11479..12111
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Displaying 12 items

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