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RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1..870
DNA (870bp) protein (290aa)
metal-dependent protein hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
metal-dependent protein hydrolase id=5803477 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
metal-dependent protein hydrolase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

875..1843
DNA (969bp) protein (323aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
obgE; GTPase ObgE; K03979 GTP-binding protein id=5803021 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Obg family GTPase CgtA
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1881..3302
DNA (1422bp) protein (474aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5803332 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutamyl-tRNA(Gln) amidotransferase subunit B
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3352..4032)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361D698
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4200..5222
DNA (1023bp) protein (341aa)
gapB; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=5227056 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
glyceraldehyde-3-phosphate dehydrogenase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5230..5325
DNA (96bp) protein (32aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5340..5552
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5634..6299
DNA (666bp) protein (222aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6458..7270)
DNA (813bp) protein (271aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7375..7923
DNA (549bp) protein (183aa)
Adenosine monophosphate-protein transferase NmFic n=102 Tax=Neisseria RepID=NMFIC_NEIMB
putative cell filamentation protein Fic; K04095 cell filamentation protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
cell filamentation protein Fic-like protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7986..8333
DNA (348bp) protein (116aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8435..8764)
DNA (330bp) protein (110aa)
Marine sediment metagenome DNA, contig: S06H3_L05975 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8857..9306
DNA (450bp) protein (150aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363FB2C
ribose-5-phosphate isomerase B
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9332..10021
DNA (690bp) protein (230aa)
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase id=5227054 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10065..10934
DNA (870bp) protein (290aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] id=5803341 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Transketolase protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10978..11997
DNA (1020bp) protein (340aa)
tktA; transketolase C-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transketolase; K00615 transketolase [EC:2.2.1.1] id=5803342 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Transketolase, central region
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

11990..12352
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12399..12617
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7D40
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12614..13603)
DNA (990bp) protein (330aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5803344 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sugar kinase, ribokinase family
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13647..14501
DNA (855bp) protein (285aa)
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Ketose-bisphosphate aldolase, class-II (Fragment) id=5227050 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tagatose-bisphosphate aldolase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14516..15484
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZV2_9BACT
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15527..16192
DNA (666bp) protein (222aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=5803352 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_23
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16326..17675
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX56_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_24
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17992..18249
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003649896
rpmE; 50S ribosomal protein L31 RpmE Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpmE; 50S ribosomal protein L31 RpmE
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_25
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

18462..19412
DNA (951bp) protein (317aa)
prfA; peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 id=5803359 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
prfA; peptide chain release factor 1
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


19577..20314
DNA (738bp) protein (246aa)
30S ribosomal protein S2P; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 id=5803360 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S2P
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_27
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20398..20985
DNA (588bp) protein (196aa)
elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
translation elongation factor Ts; K02357 elongation factor Ts id=5803361 bin=OD1_GWC2_34_28 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
elongation factor Ts
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_28
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20988..21407
DNA (420bp) protein (140aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_29
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21930..23324)
DNA (1395bp) protein (465aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Uncharacterized protein id=5800035 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_1349_30
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(23342..23782)
DNA (441bp) protein (147aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Putative uncharacterized protein id=3544251 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
family 2 glycosyl transferase
Displaying items 1-30 of 68 in total

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