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RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_1

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2..223
-----------------
DNA (222bp)
protein (74aa)
Capsule polysaccharide export protein {ECO:0000313|EMBL:KKT63452.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_2

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220..990
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FJ39_9RHOB
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like protein {ECO:0000313|EMBL:KKT63453.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacter
methyltransferase
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_3

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987..1688
-----------------
DNA (702bp)
protein (234aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
N-acylneuraminate cytidylyltransferase n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X6P4_9ACTO
N-acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:KKT63454.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_4
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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1737..2681
-----------------
DNA (945bp)
protein (315aa)
N-acetylneuraminate synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56] id=5803037 bin=OD1_GWC2_34_28 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
N-acetylneuraminate synthase Tax=GWA1_OD1_43_15
N-acetylneuraminate synthase
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_5

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2702..4909
-----------------
DNA (2208bp)
protein (736aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63456.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
O-antigen ligase WaaL
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_6

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5027..5887
-----------------
DNA (861bp)
protein (287aa)
Collagen triple helix repeat protein n=3 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MHH8_9CLOT
Protoporphyrinogen oxidase {ECO:0000313|EMBL:KKT63457.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
collagen triple helix repeat protein
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_7

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5916..6878
-----------------
DNA (963bp)
protein (321aa)
Polymerase III subunit gamma and tau protein {ECO:0000313|EMBL:KKT63458.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
hypothetical protein id=5803292 bin=OD1_GWC2_34_28 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_8

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comp(6882..8090)
-----------------
DNA (1209bp)
protein (403aa)
Putative membrane protein {ECO:0000313|EMBL:KKT63459.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
glycosyl transferase family protein id=5802976 bin=OD1_GWC2_34_28 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_9
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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8116..9510
-----------------
DNA (1395bp)
protein (465aa)
Sugar transferase Tax=GWA1_OD1_43_15
sugar transferase id=5803058 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sugar transferase
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_10
GWC2_OD1_43_8, Giovannonibacteria, Parcubacteria, Bacteria

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9516..10496
-----------------
DNA (981bp)
protein (327aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KKT20677.1}; TaxID=1618656 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_43_8.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_11
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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comp(10723..11589)
-----------------
DNA (867bp)
protein (289aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=MURB_SOLUE
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=GWA1_OD1_43_15
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_12
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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11607..12209
-----------------
DNA (603bp)
protein (201aa)
Probable pyruvoyl-dependent arginine decarboxylase Tax=GWA1_OD1_43_15
Probable pyruvoyl-dependent arginine decarboxylase id=2081017 bin=GWD2_Deltaproteobacteria_55_8 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pyruvoyl-dependent arginine decarboxylase
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_13

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12206..12556
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63464.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
sigma 54 modulation protein/ribosomal protein S30EA id=120134 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_14

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12600..15212
-----------------
DNA (2613bp)
protein (871aa)
Protein translocase subunit SecA {ECO:0000313|EMBL:KKT63465.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
Protein translocase subunit SecA id=1956098 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
secA; Preprotein translocase subunit SecA
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_15

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15217..15525
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63466.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
seg 135..162 id=34511 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_16

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15547..16110
-----------------
DNA (564bp)
protein (188aa)
RNA polymerase sigma-W factor {ECO:0000313|EMBL:KKS95463.1}; Flags: Fragment;; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.
RNA polymerase, sigma-24 subunit, ECF subfamily id=4731799 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rpoE; RNA polymerase sigma-24 factor
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_17

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16134..16493
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS95464.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
hypothetical protein id=3950287 bin=GWA2_CPR4_42_17 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_18

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16480..16932
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS95465.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
id=4731801 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_19

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16941..17375
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63470.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
Predicted protein id=1916096 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_20
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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17372..18985
-----------------
DNA (1614bp)
protein (538aa)
Efflux transporter, RND family, MFP subunit Tax=GWA1_OD1_43_15
Efflux transporter, RND family, MFP subunit (Fragment) id=4731802 bin=GWC2_OD1_43_27 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Efflux transporter, RND family, MFP subunit
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_21

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18982..19710
-----------------
DNA (729bp)
protein (243aa)
Antimicrobial peptide ABC transporter ATPase {ECO:0000313|EMBL:KKS95468.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
ABC-type transport system id=4731803 bin=GWC2_OD1_43_27 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ABC transporter
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_22
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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19707..20918
-----------------
DNA (1212bp)
protein (404aa)
ABC transporter, permease protein Tax=GWA1_OD1_43_15
ABC transporter, permease protein id=4731804 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
MacB-like periplasmic core domain containing protein
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_23

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20986..21666
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F191A
Uncharacterized protein {ECO:0000313|EMBL:KKT63474.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_24

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21677..21904
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS95471.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_25

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comp(22015..22227)
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS95472.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_26

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comp(22389..22811)
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63477.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_27

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22915..23589
-----------------
DNA (675bp)
protein (225aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=15189875 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000313|EMBL:KKS95474.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_28

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23600..24196
-----------------
DNA (597bp)
protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS95475.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
transmembrane_regions 118..137 id=9089 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_29

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24175..24429
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63480.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
transmembrane_regions 118..137 id=9089 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_8532_30
GWC2_OD1_43_8, Giovannonibacteria, Parcubacteria, Bacteria

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24434..25072
-----------------
DNA (639bp)
protein (213aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000313|EMBL:KKT21431.1}; TaxID=1618656 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_43_8.;
tetrapyrrole methylase family protein; K07056 id=84240 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Displaying items 1-30 of 38 in total

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