ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_1
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

2..289
DNA (288bp) protein (96aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_2
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

474..1055
DNA (582bp) protein (194aa)
DEAD/DEAH box helicase domain protein; K06877 DEAD/DEAH box helicase domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
DEAD/DEAH box helicase domain protein id=4242138 bin=GWC2_OD1_43_27 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
DEAD/DEAH box helicase domain protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_3
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

1062..1559
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CIK1_SYNLT
hypothetical protein; K09776 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_4
unknown

Not on your lists

comp(1659..1901)
DNA (243bp) protein (81aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_5
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(1903..2295)
DNA (393bp) protein (131aa)
iron-sulfur cluster assembly accessory protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_6
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2403..2984
DNA (582bp) protein (194aa)
Acyl-CoA hydrolase id=3870839 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
acyl-CoA hydrolase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
thioesterase superfamily protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_7
unknown

Not on your lists

comp(3017..3235)
DNA (219bp) protein (73aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_8
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(3232..3711)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI000379E5CC
omp; 17 kDa surface antigen Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
omp; 17 kDa surface antigen
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_9
GWA2_OD1_47_10, Parcubacteria, Bacteria

Not on your lists

comp(3781..4815)
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=GWA2_OD1_47_10
Uncharacterized protein id=3529385 bin=GWF2_Planctomycetes_50_10 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_10
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

5191..5814
DNA (624bp) protein (208aa)
peptidase M50 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
peptidase M50 id=5803003 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M50
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_11
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


5898..6311
DNA (414bp) protein (138aa)
30S ribosomal protein S12 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZU8_9BACT
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
30S ribosomal protein S12
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_12
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


6318..6785
DNA (468bp) protein (156aa)
30S ribosomal protein S7 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q161_9BACT
rpsG; Ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
rpsG; 30S ribosomal protein S7
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_13
unknown

Not on your lists

6801..6977
DNA (177bp) protein (59aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_14
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

6997..9102
DNA (2106bp) protein (702aa)
fusA2; elongation factor G; K02355 elongation factor G Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
fusA-3; elongation factor G; K02355 elongation factor G id=5802997 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
fusA2; elongation factor G
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_15
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

9106..9204
DNA (99bp) protein (33aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_16
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

9367..10215
DNA (849bp) protein (283aa)
HtrA2 peptidase (EC:3.4.21.108) Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
HtrA2 peptidase (EC:3.4.21.108)
HtrA2 peptidase n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z6D8_CYAAP
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_17
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(10261..10992)
DNA (732bp) protein (244aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_18
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(11007..11645)
DNA (639bp) protein (213aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_19
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(11653..12468)
DNA (816bp) protein (272aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_20
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

12626..13882
DNA (1257bp) protein (419aa)
Carboxyl-terminal protease precursor; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Carboxy-terminal processing protease CtpA n=1 Tax=Neisseria wadsworthii 9715 RepID=G4CRM6_9NEIS
peptidase S41
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_21015_21
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

13967..14827
DNA (861bp) protein (287aa)
cell division protein FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Cell divisionFtsK/SpoIIIE id=4790083 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Displaying 21 items

View Taxonomy