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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_1
R_SM2F11_48_13, SM2F11, Bacteria

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comp(3..911)
DNA (909bp) protein (303aa)
Glycosyl transferase n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XIP7_METNJ
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(895..1494)
DNA (600bp) protein (200aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=71894 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


comp(1494..3203)
DNA (1710bp) protein (570aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
arginyl-tRNA synthetase n=1 Tax=[Clostridium] glycolicum RepID=UPI0003748FEF
argS; arginyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3200..3649)
DNA (450bp) protein (150aa)
ssrA-binding protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=71404 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
single-stranded DNA-binding protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3682..4311)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003602559
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
peptidase M23
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4358..5338
DNA (981bp) protein (327aa)
Na+/Ca+ antiporter, CaCA family; K07301 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein id=5084639 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Na+/Ca+ antiporter, CaCA family
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


comp(5946..6293)
DNA (348bp) protein (116aa)
50S ribosomal protein L20P; K02887 large subunit ribosomal protein L20 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=71403 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
rplT; 50S ribosomal protein L20
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6297..6491)
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6592..7017)
DNA (426bp) protein (142aa)
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Translation initiation factor IF-3 id=3091483 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
translation initiation factor IF-3
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7193..9790)
DNA (2598bp) protein (866aa)
TPR repeats containing protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801305 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tetratricopeptide TPR_2
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10322..11992
DNA (1671bp) protein (557aa)
S-layer domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XEP6_THEPJ
S-layer protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
S-layer protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_24282_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11993..12427
DNA (435bp) protein (145aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Displaying 12 items

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