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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_1
R_SM2F11_48_13, SM2F11, Bacteria

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comp(1..609)
-----------------
DNA (609bp)
protein (203aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
pyrophosphatase n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B76B31
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

776..1144
-----------------
DNA (369bp)
protein (123aa)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_3
R_SM2F11_48_13, SM2F11, Bacteria

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comp(1323..1589)
-----------------
DNA (267bp)
protein (89aa)
rnp-1 like RNA-binding protein id=5098363 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
putative RNA-binding protein RbpA
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_4
R_SM2F11_48_13, SM2F11, Bacteria

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comp(1726..2193)
-----------------
DNA (468bp)
protein (156aa)
tRNA/rRNA methyltransferase SpoU id=15189825 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
tRNA/rRNA methyltransferase (SpoU)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_5
R_SM2F11_48_13, SM2F11, Bacteria

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comp(2212..2457)
-----------------
DNA (246bp)
protein (82aa)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_6
R_SM2F11_48_13, SM2F11, Bacteria

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comp(2460..3329)
-----------------
DNA (870bp)
protein (290aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YFW2_9BACT
putative prophage LambdaBa04, tape measure protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_7
R_SM2F11_48_13, SM2F11, Bacteria

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comp(3338..3676)
-----------------
DNA (339bp)
protein (113aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PKW5_9ZZZZ
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_8
unknown

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comp(4245..5432)
-----------------
DNA (1188bp)
protein (396aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_9

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5805..7289
-----------------
DNA (1485bp)
protein (495aa)
Recombinase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVL3_HIPMA
recombinase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7132..7596)
-----------------
DNA (465bp)
protein (155aa)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7606..7734)
-----------------
DNA (129bp)
protein (43aa)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7766..8419
-----------------
DNA (654bp)
protein (218aa)
flavodoxin reductase family protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8437..8583
-----------------
DNA (147bp)
protein (49aa)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(8686..9009)
-----------------
DNA (324bp)
protein (108aa)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9059..10498
-----------------
DNA (1440bp)
protein (480aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Putative glycosyltransferase id=1924290 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_16
R_SM2F11_46_14, SM2F11, Bacteria

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10503..11585
-----------------
DNA (1083bp)
protein (361aa)
hypothetical protein id=5801652 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_17
R_SM2F11_48_13, SM2F11, Bacteria

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11569..12672
-----------------
DNA (1104bp)
protein (368aa)
glycosyl transferase group 1 id=95872 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_18
R_SM2F11_48_13, SM2F11, Bacteria

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12669..13757
-----------------
DNA (1089bp)
protein (363aa)
group 1 glycosyl transferase id=5090604 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
glycosyl transferase, group 1
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13754..14860
-----------------
DNA (1107bp)
protein (369aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=2169484 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_20
R_SM2F11_48_13, SM2F11, Bacteria

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14805..15788
-----------------
DNA (984bp)
protein (328aa)
hypothetical protein; K07001 NTE family protein id=12496016 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
patatin
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_21
R_SM2F11_48_13, SM2F11, Bacteria

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15785..16531
-----------------
DNA (747bp)
protein (249aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6C257
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

16524..17780
-----------------
DNA (1257bp)
protein (419aa)
tte:TTE2575 murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] id=53758 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_23
R_SM2F11_48_13, SM2F11, Bacteria

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17784..18707
-----------------
DNA (924bp)
protein (308aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Geobacter sp. M18 RepID=C6MV99_9DELT id=36182 bin=ACD30 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

18685..19113
-----------------
DNA (429bp)
protein (143aa)
Ribosomal subunit interface protein n=19 Tax=Francisella tularensis RepID=A4IX16_FRATW
yhbH; ribosome hibernation protein YhbH
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

19182..20561
-----------------
DNA (1380bp)
protein (460aa)
Arginine decarboxylase n=1 Tax=planctomycete KSU-1 RepID=I3IJ25_9PLAN
orn/dap/arg decarboxylase 2
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_26
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

20572..21417
-----------------
DNA (846bp)
protein (282aa)
speB1; arginase (EC:3.5.3.1)
Arginase n=2 Tax=Pelagibacter ubique RepID=Q4FP61_PELUB
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_27
R_SM2F11_46_14, SM2F11, Bacteria

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21419..22432
-----------------
DNA (1014bp)
protein (338aa)
Deoxyhypusine synthase id=3730390 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
deoxyhypusine synthase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8166_28
R_SM2F11_48_13, SM2F11, Bacteria

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22436..23056
-----------------
DNA (621bp)
protein (207aa)
GDSL-like Lipase/Acylhydrolase family protein id=1901318 bin=GWD2_Deltaproteobacteria_55_8 species=Xenococcus sp. PCC 7305 genus=Xenococcus taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GDSL family lipase
Displaying 28 items

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