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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_1
R_SM2F11_48_13, SM2F11, Bacteria

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comp(3..890)
DNA (888bp) protein (296aa)
concanavalin A-like lectin/glucanase superfamily Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
conserved repeat domain protein id=56201 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RHS repeat-associated core domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

996..1370
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003622DB7
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

1388..1723
DNA (336bp) protein (112aa)
Rhodanese-like protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SLC9_PLABD
rhodanese-like protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rhodanese-like protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_4
R_SM2F11_48_13, SM2F11, Bacteria

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1903..2208
DNA (306bp) protein (102aa)
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
groES; co-chaperonin GroES; K04078 chaperonin GroES id=53261 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
groES; co-chaperonin GroES
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2227..3891
DNA (1665bp) protein (555aa)
chaperonin Cpn60 ; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801477 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
chaperonin Cpn60
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_6
Parcubacteria bacterium GW2011_GWA2_52_8, Parcubacteria, Bacteria

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4021..5211
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=uncultured bacterium RepID=K2BRA4_9BACT
S-adenosylmethionine synthase {ECO:0000313|EMBL:KKW28823.1}; TaxID=1618857 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_52_8.;"
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5336..5476)
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5739..6155
DNA (417bp) protein (139aa)
DnaK suppressor protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0T4_9AQUI
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
TraR/DksA family transcriptional regulator
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

6320..6595
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

6718..7047
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


7388..7588
DNA (201bp) protein (67aa)
50S ribosomal protein L32 n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B68BDE
LSU ribosomal protein L32P Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rpmF; 50S ribosomal protein L32
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7592..8038
DNA (447bp) protein (149aa)
putative transcription termination factor Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
nusB; N utilization substance protein B; K03625 N utilization substance protein B id=2882 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
putative transcription termination factor
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8101..8472
DNA (372bp) protein (124aa)
Transcriptional activator protein Irlr n=1 Tax=uncultured bacterium RepID=K2EZH3_9BACT
two-component response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
two-component response regulator
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8561..10249
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CR62_9BACT
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
general secretory pathway protein E
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10246..11631
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DE79_9BACT
type II secretory pathway, component PulF Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
type II secretion system protein F
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11656..12333
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037FAB73
excinuclease abc c subunit domain protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
excinuclease abc c subunit domain protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12308..13801
DNA (1494bp) protein (498aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
LVIVD repeat-containing protein id=28160 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13854..14123
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_19
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

14430..14564
DNA (135bp) protein (45aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10243_20
R_RIF_OD1_13_59_16, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

14569..15060
DNA (492bp) protein (164aa)
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_59_16_curated
Type II secretion system pseudopilin OxpG id=1889147 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
N-terminal cleavage protein
Displaying 20 items

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