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RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_1
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

153..314
DNA (162bp) protein (54aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_2
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

311..2413
DNA (2103bp) protein (701aa)
fusA; translation elongation factor G; K02355 elongation factor G Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
Elongation factor G id=3736614 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
fusA; translation elongation factor G
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_3
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(2451..2681)
DNA (231bp) protein (77aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_4
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

2782..3105
DNA (324bp) protein (108aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_5
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

3304..4494
DNA (1191bp) protein (397aa)
tufA; elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
translation elongation factor Tu; K02358 elongation factor Tu id=15189778 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
tufA; elongation factor Tu
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_6
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


4534..4893
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035D46DD
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
rpsJ; 30S ribosomal protein S10
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_7
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


5430..6041
DNA (612bp) protein (204aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L3
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_8
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


6045..6686
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY28_9BACT
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
rplD; 50S ribosomal protein L4
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_9
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


6696..7094
DNA (399bp) protein (133aa)
rplW; 50S ribosomal protein L23 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L23 id=2824337 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rplW; 50S ribosomal protein L23
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_10
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


7100..7930
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Leptolyngbya boryana RepID=UPI0003722A2F
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
LSU ribosomal protein L2p (L8e)
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_11
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


7941..8243
DNA (303bp) protein (101aa)
rpsS; ribosomal protein S19 (BS19) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
Ribosomal protein S19 id=1956475 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S19
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_12
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


8253..8591
DNA (339bp) protein (113aa)
50S ribosomal protein L22 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L22 id=2824330 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L22
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_13
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


8709..9398
DNA (690bp) protein (230aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQP3_9ZZZZ
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
30S ribosomal protein S3
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_14
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

9403..9666
DNA (264bp) protein (88aa)
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
Putative uncharacterized protein id=2438048 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_15
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


9671..10075
DNA (405bp) protein (135aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L16 id=2824327 bin=GWC1_OD1_38_17 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L16
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_16
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

10081..10263
DNA (183bp) protein (61aa)
coiled-coil 4..28 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
coiled-coil 4..28 id=8863 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_17
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


10270..10551
DNA (282bp) protein (94aa)
30S ribosomal protein S17 n=1 Tax=uncultured bacterium RepID=K1ZRS2_9BACT
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
30S ribosomal protein S17
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_18
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


10548..10913
DNA (366bp) protein (122aa)
rplN; large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L14 id=2154492 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rplN; large subunit ribosomal protein L14
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_19
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


10918..11223
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=1 Tax=uncultured bacterium RepID=K2ABC0_9BACT
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L24
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_20
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


11231..11767
DNA (537bp) protein (179aa)
50S ribosomal protein L5 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036A0E58
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L5
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_21
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


11769..11954
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00035EECD7
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
30S ribosomal protein S14
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_22
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


11959..12342
DNA (384bp) protein (128aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
30S ribosomal protein S8 id=2824239 bin=GWC1_OD1_38_17 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S8
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_23
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


12347..12889
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371A5D4
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L6
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_24
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


12899..13270
DNA (372bp) protein (124aa)
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=85849 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
50S ribosomal protein L18
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_25
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


13290..13781
DNA (492bp) protein (164aa)
30S ribosomal protein S5 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036A7D71
30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
30S ribosomal protein S5P
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_26
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


13784..14203
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003794552
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_27
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


14209..15480
DNA (1272bp) protein (424aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
ttr:Tter_0735 preprotein translocase, SecY subunit; K03076 preprotein translocase subunit SecY id=17305 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
preprotein translocase subunit SecY
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_28
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

15488..16102
DNA (615bp) protein (205aa)
adenylate kinase (EC:2.7.4.3) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] id=5803018 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
adenylate kinase (EC:2.7.4.3)
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_29
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

16109..16915
DNA (807bp) protein (269aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q1L6_9FIRM
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_4477_30
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

16927..17397
DNA (471bp) protein (157aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD05D
Holliday junction resolvase YqgF
Displaying items 1-30 of 38 in total

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