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RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_1
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_2
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(336..1874)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036EBB48
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
translation initiation factor IF-2
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_3
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(1902..2375)
DNA (474bp) protein (158aa)
Uncharacterized protein n=7 Tax=Clostridium thermocellum RepID=E6URG0_CLOTL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_4
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(2418..2588)
DNA (171bp) protein (57aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_5
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(2702..3223)
DNA (522bp) protein (174aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_6
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(3231..3881)
DNA (651bp) protein (217aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_7
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(3994..4305)
DNA (312bp) protein (104aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_8
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(4604..5419)
DNA (816bp) protein (272aa)
type 11 methyltransferase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
Methyltransferase id=2914633 bin=GWA1_ZB2_49_26 species=uncultured Acidobacteria bacterium A11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
type 11 methyltransferase
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_9
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(5792..6799)
DNA (1008bp) protein (336aa)
Vitamin K epoxide reductase
DSBA oxidoreductase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
DSBA oxidoreductase id=3544170 bin=GWA1_ZB2_49_26 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_10
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

7608..9074
DNA (1467bp) protein (489aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_cura
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F2027
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_11
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

9090..9353
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DE74_HALXS
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_12
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

9355..9984
DNA (630bp) protein (210aa)
DedA family membrane protein n=1 Tax=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) RepID=A0AIU9_LISW6
DedA family membrane protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
DedA family membrane protein
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_13
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(9935..10252)
DNA (318bp) protein (106aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_14
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(10336..11073)
DNA (738bp) protein (246aa)
exported protein of unknown function Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
TolA protein id=5095360 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
exported protein of unknown function
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_15
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(11066..11710)
DNA (645bp) protein (215aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_16
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(11776..12339)
DNA (564bp) protein (188aa)
RNA polymerase sigma factor n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7C1_SPHTD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
ECF subfamily RNA polymerase sigma-24 subunit
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_17
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(12341..12541)
DNA (201bp) protein (67aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_18
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

12579..14009
DNA (1431bp) protein (477aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
Putative uncharacterized protein id=3506690 bin=GWC1_OD1_38_17 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_19
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(14029..16494)
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FE861
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_20
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(16497..16883)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI000364C360
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_21
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

17248..17835
DNA (588bp) protein (196aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] id=5101714 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
NUDIX hydrolase
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_22
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

18063..19046
DNA (984bp) protein (328aa)
prfB; Protein chain release factor B; K02836 peptide chain release factor 2 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
Peptide chain release factor 2 id=4838917 bin=GWC2_OD1_43_27 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
prfB; protein release subunit factor B
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_23
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

19183..19866
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036C68A9
ftsE; cell-division ABC transporter (ATP-binding protein) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
ftsE; cell division ATP-binding protein
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_24
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

19871..20779
DNA (909bp) protein (303aa)
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
Uncharacterized protein id=3506542 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ftsX; cell division protein FtsX
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_25
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

20981..21445
DNA (465bp) protein (155aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_26
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

21639..22004
DNA (366bp) protein (122aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_27
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(22057..22692)
DNA (636bp) protein (212aa)
Os01g0951200; K13421 uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=15190087 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
uridine monophosphate synthetase (EC:4.1.1.23 2.4.2.10)
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_28
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

22722..23294
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7X2_METEZ
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_29
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

23352..24329
DNA (978bp) protein (326aa)
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
Aminodeoxychorismate lyase id=2002547 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
aminodeoxychorismate lyase
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_9963_30
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

24608..26407
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L8S8_9BACT
GTP-binding protein TypA/BipA Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
GTP-binding protein TypA/BipA
Displaying items 1-30 of 37 in total

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