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RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_1
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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3..443
DNA (441bp) protein (147aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_2
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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621..1613
DNA (993bp) protein (331aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5803344 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sugar kinase, ribokinase family
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_3
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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1610..2476
DNA (867bp) protein (289aa)
fba; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
fba; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003655BCC
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_4
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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2522..3199
DNA (678bp) protein (226aa)
ctc; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L25 id=3506654 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ctc; 50S ribosomal protein L25
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_5
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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3242..4606
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037D57DA
peptidase M23 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
peptidase M23
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_6
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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comp(4627..5655)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037D6332
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
prfA; peptide chain release factor 1
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_7
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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comp(5761..5970)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035DA153
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
50S ribosomal protein L31
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_8
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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6152..6937
DNA (786bp) protein (262aa)
30S ribosomal protein S2 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003787AF4
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
30S ribosomal protein S2
RIFCSPHIGHO2_01_FULL_OD1_50_25_rifcsphigho2_01_scaffold_51539_9
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

6980..7564
DNA (585bp) protein (195aa)
elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
elongation factor Ts
Elongation factor Ts id=2184610 bin=GWE2_RBX1_39_32 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Displaying 9 items

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