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RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_1
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_2
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(273..1259)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z338_9PROT
hypothetical protein; K09799 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_3
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(1357..1692)
DNA (336bp) protein (112aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=3012935 bin=GWC1_OD1_38_17 species=Frankia symbiont of Datisca glomerata genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_4
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(1958..2266)
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_5
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(2273..2824)
DNA (552bp) protein (184aa)
coiled-coil Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
coiled-coil id=5801839 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_6
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(2839..3393)
DNA (555bp) protein (185aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_7
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(3621..4748)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003795D65
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_8
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(4840..6750)
DNA (1911bp) protein (637aa)
S-layer domain protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
S-layer domain protein id=2824651 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_9
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(6791..7378)
DNA (588bp) protein (196aa)
id=3486136 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
id=3486136 bin=GWA1_ZB2_49_26 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_10
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(7420..7905)
DNA (486bp) protein (162aa)
id=2824648 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
id=2824648 bin=GWC1_OD1_38_17 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_11
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(7909..8802)
DNA (894bp) protein (298aa)
id=2824647 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
id=2824647 bin=GWC1_OD1_38_17 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_12
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(8799..10031)
DNA (1233bp) protein (411aa)
pilC; type IV pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Type II secretion system F domain id=2824644 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
pilC; type IV pilus inner membrane protein PilC
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_13
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(10138..11946)
DNA (1809bp) protein (603aa)
Type II secretion system protein E Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Type II secretion system protein E id=2824642 bin=GWC1_OD1_38_17 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Type II secretion system protein E
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_14
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(12027..12392)
DNA (366bp) protein (122aa)
winged helix family two component transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Response regulator receiver protein id=3486131 bin=GWA1_ZB2_49_26 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
winged helix family two component transcriptional regulator
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_15
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(12477..13430)
DNA (954bp) protein (318aa)
putative Histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
putative Histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003804C61
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_16
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

13513..14514
DNA (1002bp) protein (334aa)
Integrase catalytic subunit n=1 Tax=uncultured bacterium RepID=K1XEN5_9BACT
integrase catalytic subunit Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
integrase catalytic subunit
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_17
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

14891..15421
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036613FC
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_18
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(15468..17834)
DNA (2367bp) protein (789aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037F8589
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_19
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(17872..18177)
DNA (306bp) protein (102aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_20
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

18296..18961
DNA (666bp) protein (222aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
hypothetical protein
Phosphoesterase, PA-phosphatase related protein id=3811370 bin=GWF2_Lentisphaerae_49_21 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_21
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

19135..19548
DNA (414bp) protein (138aa)
id=3486162 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
id=3486162 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_22
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(19614..19892)
DNA (279bp) protein (93aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
DNA-binding protein HupA id=3506549 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hup; DNA-binding protein Hup
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_23
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(20002..20790)
DNA (789bp) protein (263aa)
hypothetical protein; K09769 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Metallophosphoesterase, MG_246/BB_0505 family id=3506548 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Conserved hypothetical protein CHP00282
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_24
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(20791..22338)
DNA (1548bp) protein (516aa)
HDIG/KH domain-containing protein; K06950 uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Ribonuclease Y id=3506547 bin=GWC1_OD1_38_17 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
HDIG/KH domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10586_25
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(22755..23240)
DNA (486bp) protein (162aa)
speH; S-adenosylmethionine decarboxylase proenzyme SpeH (EC:4.1.1.50 2.5.1.16) Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
spermidine synthase n=1 Tax=Fischerella thermalis RepID=UPI00030758BA
S-adenosylmethionine decarboxylase proenzyme, prokaryotic class 1B
Displaying 25 items

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